gene-fusion

There are 0 repository under gene-fusion topic.

• suhrig / arriba

  Fast and accurate gene fusion detection from RNA-Seq data

  gene-fusionsrna-seqcancergene-fusionfusion-genefusion-genesvariant-callingstructural-variationstarvirus-integration
  Language:C++ 210

• nf-core / rnafusion

  RNA-seq analysis pipeline for detection of gene-fusions

  nf-corenextflowworkflowrna-seqrnapipelinefusion-genesfusiongene-fusion
  Language:Nextflow 130

• murphycj / AGFusion

  Python package to annotate and visualize gene fusions.

  gene-fusionproteinfusionrna-seqpythoncancercancer-genomicschimerabioinformaticsstructural-variation
  Language:Python 55

• bm2-lab / neoFusion

  neoantigengene-fusion
  Language:Python 12

• ylab-hi / ScanNeo2

  Snakemake-based computational workflow for neoantigen prediction from diverse sources

  epitopegene-fusionindelsneoantigenspeptidesnakemakesnakemake-workflowsplicingexitronneoepitope
  Language:HTML 7

• Zheng-NGS-Lab / SplitFusion

  SplitFusion is a clinical-grade fusion detection algorithm with high research potentials.

  gene-fusion
  Language:R 4

• CTrierMaansson / DNAfusion

  Identification of gene-fusions, including EML4-ALK

  bioconductor-packagecirculating-tumor-dnagene-fusiongeneticsliquid-biopsynext-generation-sequencingrtargeted-sequencingvariant-calling
  Language:R 3

• federicacitarrella / FusionFlow

  FusionFlow is a bioinformatic pipeline that enables the detection of gene fusions from RNA and DNA data.

  bioinformaticsbioinformatics-pipelinepipelinednarnagene-fusiontumor
  Language:Nextflow 1

• LedaKatopodi / arriba-y-abajo

  🎨 A visualization library for downstream (or abajo-stream) investigation of gene fusion events from Arriba.

  arribagene-fusionvisualization
  Language:R 0

• ycl6 / STAR-Fusion

  STAR-Fusion codebase

  rna-seqgene-fusion
  Language:Perl