fusion-genes

There are 0 repository under fusion-genes topic.

suhrig / arriba
Fast and accurate gene fusion detection from RNA-Seq data
gene-fusions rna-seq cancer gene-fusion fusion-gene fusion-genes variant-calling structural-variation star virus-integration
Language:C++ 210
ndaniel / fusioncatcher
Finder of Somatic Fusion Genes in RNA-seq data
fusion-genes rna-seq somatic-fusion-genes
Language:Python 137
nf-core / rnafusion
RNA-seq analysis pipeline for detection of gene-fusions
nf-core nextflow workflow rna-seq rna pipeline fusion-genes fusion gene-fusion
Language:Nextflow 130
Kingsford-Group / squid
SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data
rna-seq structural-variation fusion-genes non-fusion-genes
Language:C++ 40
Clinical-Genomics / fusion-report
Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.github.io/fusion-report/example/
fusion-genes report visualization
Language:Python 24
salzmanlab-admin / DEEPEST-Fusion
DEEPEST-Fusion is a fusion detection algorithm specially designed for screening massive cancer sequencing databases
bioinformatics-pipeline fusion-genes tcga rna-seq
Language:R 5
haoziyeung / somatic_pipeline
肿瘤体细胞突变检测流程（组织、cfDNA均可，需要有对照）
somatic-mutations sentieon fusion-genes cnv
Language:Perl 4

suhrig / arriba