Skyler Kuhn's repositories
apprise
Apprise - Push Notifications that work with just about every platform!
awesome-pipeline
A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin
Bend
A massively parallel, high-level programming language
covalent
Pythonic tool for running machine-learning/high performance/quantum-computing workflows in heterogeneous environments.
deepsomatic
DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal sequencing data.
draw-a-ui
Draw a mockup and generate html for it
drawdb
Free, simple, and intuitive online database design tool and SQL generator.
fasthtml
The fastest way to create an HTML app
FLARE
RNA edit detection (SAILOR) and peak calling (FLARE)
genome-seek
Clinical Whole Genome Sequencing Pipeline
gosling.js
Grammar of Scalable Linked Interactive Nucleotide Graphics
immunedeconv
A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution methods
JunctionSeq
The JunctionSeq R package is a powerful tool for testing and visualizing differential usage of exons and splice junctions in next-generation, high-throughput RNA-Seq experiments.
just
🤖 Just a command runner
methyl-seek
Bisulphite-sequencing based methylation pipeline
Nim
Nim is a statically typed compiled systems programming language. It combines successful concepts from mature languages like Python, Ada and Modula. Its design focuses on efficiency, expressiveness, and elegance (in that order of priority).
ollama
Get up and running with Llama 3, Mistral, Gemma 2, and other large language models.
ondemand
Supercomputing. Seamlessly. Open, Interactive HPC Via the Web
shadcn-ui
Beautifully designed components built with Radix UI and Tailwind CSS.
superFreq
Analysis pipeline for cancer sequencing data
taipy
Turns Data and AI algorithms into production-ready web applications in no time.
text-generation-webui
A Gradio web UI for Large Language Models. Supports transformers, GPTQ, AWQ, EXL2, llama.cpp (GGUF), Llama models.
trogon
Easily turn your Click CLI into a powerful terminal application
wing
The Wing Programming Language
zed
Code at the speed of thought – Zed is a high-performance, multiplayer code editor from the creators of Atom and Tree-sitter.
zig
General-purpose programming language and toolchain for maintaining robust, optimal, and reusable software.