YangLab@Northwestern (ylab-hi)

YangLab@Northwestern

ylab-hi

Geek Repo

This repo stores the codes for Yang lab projects

Home Page:https://ylab-hi.github.io/

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YangLab@Northwestern's repositories

ScanNeo

A pipeline for identifying indel derived neoantigens using RNA-Seq data

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pxblat

PxBLAT: An Efficient and Ergonomic Python Binding Library for BLAT

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ScanExitron

A computational workflow for exitron splicing identification

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ScanNeo2

Snakemake-based computational workflow for neoantigen prediction from diverse sources

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ScanITD

A python tool to detect internal tandem duplication with robust variant allele frequency estimation

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ScanExitronLR

A package for the characterization and quantification of exitron splicing events in long-read RNA-seq

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BINARY

BIoiNformatics Algorithms libRarY aka BINARY

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yanglab-guide

The repo contain content about yang's lab guide.

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docker-images

docker-images

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kent

UCSC Genome Browser source tree. Stable branch: "beta".

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lncGSEA

An R package to identify lncRNA associated pathway

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pbsim2

PBSIM2: a simulator for long read sequencers with a novel generative model of quality scores

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ylab-hi.github.io

Official website for Yang Lab

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