neoantigen

There are 2 repositories under neoantigen topic.

• bm2-lab / pTuneos

  pTuneos: prioritizing Tumor neoantigen from next-generation sequencing data

  immunotherapyneoantigen
  Language:Python 34

• ShixiangWang / Variants2Neoantigen

  A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)

  cancer-genomicsmafneoantigenvcf
  Language:Shell 29

• Xinglab / IRIS

  IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening

  immunotherapyrna-splicingneoantigentumor-antigenrna-seq
  Language:Python 24

• bm2-lab / neoFusion

  gene-fusionneoantigen
  Language:Python 13

• uclahs-cds / package-moPepGen

  Multi-Omics Peptide Generator

  cancer-genomicsneoantigenproteogenomicsproteomicsgenomics
  Language:Python 6

• XSLiuLab / neoantigen_depletion

  neoantigen depletion checking and detection

  neoantigenantigenimmunotherapy
  Language:R 5

• bm2-lab / PREP

  PREP: Prioritizing of RNA Editing-based Peptides

  rna-editingneoantigen
  Language:Python 4

• danielnzg85 / 2018-EPFL-IGEM

  Neoantigen Discovery pipeline

  genomicscancer-genomicscancerantigenneoantigen
  Language:HTML 3

• ShixiangWang / neopeptides

  Calculate and explore property indices of peptides for cancer immunotherapy study

  immunotherapypeptidesr-packageneoantigen
  Language:R 1