gene-expression-signatures

There are 0 repository under gene-expression-signatures topic.

greenelab / multi-plier
An unsupervised transfer learning approach for rare disease transcriptomics
bioinformatics-analysis gene-expression-signatures machine-learning multiplier plier rare-diseases analysis methodology dataset
Language:HTML 42
Acare / hacksig
A Tidy Framework to Hack Gene Expression Signatures
gene-expression-signatures gene-set-enrichment r-package rstats
Language:R 19
andymckenzie / BRETIGEA
Brain Cell Type Specific Gene Expression Analysis
cell-type gene-expression gene-expression-signatures
Language:R 14
clustermole
igordot / clustermole
Unbiased single-cell transcriptomic data cell type identification
single-cell cell-type cell-type-classification cell-type-matching gene-expression-signatures scrna-seq cell-type-annotation cell-type-identification
Language:R 11
tbrunetti / NMF_unsupervised_clustering
Non-Negative Matrix Factorization for Gene Expression Clustering
nmf gene-expression-profiles unsupervised-learning clustering nonnegative-matrix-factorization clustering-algorithm clustering-methods kullback-leibler-divergence euclidean-distances gene-expression-signatures
Language:Python 7
MaayanLab / creeds
The web application for the crowdsourced gene expression signatures: http://amp.pharm.mssm.edu/creeds/
gene-expression-signatures
Language:JavaScript 3
dccc-lab / AsthmaGXSigs
Shared TREM-1 expression signatures of asthma affection and control
enrichment-analysis gene-expression genomics gene-expression-signatures gene-expression-profiles r rstats asthma pathway-analysis published
Language:HTML 2
MolecularPathologyLab / SubtypeExploreR
Web application that enables users to compare the expression of genes or enrichment of gene sets between different molecular subtypes of colorectal cancer
enrichment-analysis gene-expression gene-expression-signatures gene-set-enrichment-analysis gene-sets gsea pathway-enrichment-analysis r shiny
Language:HTML 1
biomedicalinformaticsgroup / sfariexpression
Code repository for SFARI Genes and where to find them; classification modelling to identify genes associated with Autism Spectrum Disorder from RNA-seq data
autism-spectrum-disorder disease gene-expression-signatures
Language:R 0
sionaris / Shiny_bc_paper
A repository that contains all the code for the interactive Shiny app of the models developed in our work on predicting response to neoadjuvant treatment.
breast-cancer chemotherapy gene-expression-signatures machine-learning endocrine-treatment
Language:R 0
JDRomano2 / gexpro
A library and toolkit for common representation and analysis of gene expression profile data
computational-biology gene-expression-profiles gene-expression-signatures deep-learning library
Language:C++
RRafiee / NIMBLE
NanostrIng MB cLassifiEr
nanostring classification classifier subgroups support-vector-machines svm-model gene training expression gene-expression-signatures medulloblastoma rna-seq next-generation-sequencing shiny shiny-applications normalization ncounter
Language:R
RRafiee / NSCLC
Development and validation of a robust RNA-seq based prognostic signature in non-small cell lung cancer
adenoarcinoma development gene-expression-signatures lung non-small-cell rna-seq squamous therapy validation