nanostring

There are 1 repository under nanostring topic.

nf-core / nanostring
An analysis pipeline for Nanostring nCounter expression data.
nf-core nextflow workflow pipeline nanostring nanostringnorm
Language:Nextflow 12
NACHO
mcanouil / NACHO
NAnostring quality Control dasHbOard
nanostring shiny quality-control normalisation r-package r-stats rstats mirna mrna
Language:R 7
amarinderthind / Nanostring_normalization_Meta
nanostring normalization rnaseq batch ruv
Language:R 2
calebclass / Shiny-NanoTube
A web app for easier NanoString gene expression analysis
shiny differential-expression nanostring
Language:R 2
KevinMenden / nanoR
R package for analysis of NanoString data
nanostring analysis
Language:R 2
leosfan / fastq2dcc
Install the GeoMxNGSPipeline_Linux_2.0.0.16 tool from Nanostring/illumina to docker container, and convert it to Singularity.
digital-pathology dsp geomx nanostring singularity-container
1
antosalerno / TEPA_code
Analysing single-cell and DSP data to test the effect of copper chelation with TEPA in Neuroblastoma mice
bioinformatics cancer-genomics cancer-research copper genomics neuroblastoma r-language seurat single-cell-analysis single-cell-omics spatial-data-analysis spatial-transcriptomics copper-chelation digital-spatial-profiling geomx nanostring rhapsody
Language:R
RRafiee / GeneExpressionClassification
NanoString classifier based on NGS training set
nanostring ngs next-generation-sequencing normalization support-vector-machines classification classifier probability gene-expression-profiles gene-expression
Language:R
RRafiee / NIMBLE
NanostrIng MB cLassifiEr
nanostring classification classifier subgroups support-vector-machines svm-model gene training expression gene-expression-signatures medulloblastoma rna-seq next-generation-sequencing shiny shiny-applications normalization ncounter
Language:R