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Accurate and flexible loops calling tool for 3D genomic data.
Enhanced and elegant flexible peak/loop/domain -calling and analysis tool for 1D/3D genomic data.
Paired Genomic Loci Tool Suite
Identification of enriched motif pairs from chromatin interaction data
An archived version of the InteractionSet repository, see https://github.com/LTLA/InteractionSet for the active version.
Compare different sets of TADs inferred from Hi-C data (or other 3C technique) using different methods.
Identification of enriched motif pairs from chromatin interaction data
An R shiny application for visualization of EndoC-bH1 and human islet genomic data