trac-looping

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cLoops
YaqiangCao / cLoops
Accurate and flexible loops calling tool for 3D genomic data.
bioinformatics chia-pet hichip chromatin-interaction 3d-genome hi-c clustering dbscan python ngs algorithm chromatin-loops pipeline sequencing stripes chromatin-stripes loops-calling tool trac-looping example-data
Language:Python 108
YaqiangCao / cLoops2
Enhanced and elegant flexible peak/loop/domain -calling and analysis tool for 1D/3D genomic data.
bioinformatics-tool chromatin-interaction cloops2 clustering loops peaks 3d-genome 3d-genome-visualization domains stripes python chia-pet hi-c trac-looping hichip differential-enriched-loops un-limited-resolution next-generation-sequencing rehoboam montage
Language:Python 38