YaqiangCao

cLoops

Accurate and flexible loops calling tool for 3D genomic data.

cLoops2

Enhanced and elegant flexible peak/loop/domain -calling and analysis tool for 1D/3D genomic data.

yaqiangcao.github.io

Yaqiang Cao Homepage

neuroArms

my code house for some deep learning problems

cLoops_supplementaryData

Hi-TrAC_active_subTADs_supplemental

academicpages.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

allanlab

Allan Lab website

anndata

Annotated data.

awesome-streamlit

The purpose of this project is to share knowledge on how awesome Streamlit is and can be

Blog

browserTracks

CHM13

The complete sequence of a human genome

cLoops2_supp

cLoops2 manuscript supplemental files

d2l-en

Interactive deep learning book with multi-framework code, math, and discussions. Adopted at 500 universities from 70 countries including Stanford, MIT, Harvard, and Cambridge.

ddia

《Designing Data-Intensive Application》DDIA中文翻译

github-clone-count-badge

GitHub clone count badge using shields.io

igv-webapp

IGV Web App

liger

R package for integrating and analyzing multiple single-cell datasets

loguru

Python logging made (stupidly) simple

manta

Structural variant and indel caller for mapped sequencing data

megadepth

BigWig and BAM utilities

numpy-ml

Machine learning, in numpy

PaperScraper

A web scraping tool to systematically extract the text of scientific papers and corresponding metadata from university accessible journals.

rapids-single-cell-examples

Examples of single-cell genomic analysis accelerated with RAPIDS

README

README文件语法解读，即Github Flavored Markdown语法介绍

seq2seq

A general-purpose encoder-decoder framework for Tensorflow

STREAM

STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data

t-rec-rs

Blazingly fast terminal recorder that generates animated gif images for the web written in rust

tokei

Count your code, quickly.