amber
There are 4 repositories under amber topic.
amberframework / amber
A Crystal web framework that makes building applications fast, simple, and enjoyable. Get started with quick prototyping, less bugs, and blazing fast performance.
Language:Crystal 2551- Language:Go 1112
ORM Model with Adapters for mysql, pg, sqlite in the Crystal Language.
Language:Crystal 293openforcefield / openff-toolkit
The Open Forcefield Toolkit provides implementations of the SMIRNOFF format, parameterization engine, and other tools. Documentation available at http://open-forcefield-toolkit.readthedocs.io
Language:Python 293jewettaij / moltemplate
A general cross-platform tool for preparing simulations of molecules and complex molecular assemblies
Language:Python 240- Language:Crystal 221
A project (and object) for storing, manipulating, and converting molecular mechanics data.
Language:Python 60docelic / amber-introduction
Introduction to the Amber web framework and its features
Language:Crystal 52insilichem / ommprotocol
A command line application to launch molecular dynamics simulations with OpenMM
Language:Python 39- Language:Logos 38
bitrockteam / amber-components
Web Components implementation of the Amber Design System.
Language:CSS 28- ParaMolLanguage:Python 25
KuguHome / openhab-binding-wmbus
openHAB binding to receive and decode WMBus messages (OMS+Techem)
Language:Java 20bio-phys / cnt-gaff
Build atomistic structures of carbon nanotubes with the possibility to add functional groups (OH, COOH, COO-) and assigns generalized Amber (GAFF) parameters to them.
Language:Rich Text Format 19- dabbleLanguage:Rich Text Format 17
GrahamLea / amberelectic-api-tools
A collection of command-line tools (and Python functions) that can be used to work with data from the Amber Electric API.
Language:Python 17HECBioSim / Longbow
Longbow is a tool for automating simulations on a remote HPC machine. Longbow is designed to mimic the normal way an application is run locally but allows simulations to be sent to powerful machines.
Language:Python 17- Language:Crystal 16
m3g / ComplexMixtures.jl
Package to perform minimum-distance distribution analyses of complex solute-solvent interactions
Language:Julia 14Docs & guides for the Amber Design System.
Language:Vue 10- Language:Crystal 9
ChangJoo-Park / amber-realworld-example-app
WIP. amber framework realworld example app
Language:Crystal 9- Language:Vue 8
- addNewResidue.py
kimjc95 / addNewResidue.py
This code adds custom-made amino acids to the GROMACS forcefield directory.
Language:Python 8 - vue-recipe
progressive-amber / vue-recipe
A Vue.js recipe for the Amber Framework.
Language:Vue 8 forsaken1 / triathlets
Web app for Vladivostok's triathlets
Language:Crystal 7- Language:JavaScript 6
- Language:Crystal 6
emleddin / comp-chem-website
A Jekyll website for the research guides--UNIX, AMBER, Analysis, and R.
Language:CSS 5hanuor / amber
Power your app's data links with named entity recognition and disambiguation. A special library for android.
Language:Java 5Welding-Torch / Amber-theme
Amber-theme for Windows Terminal
amberkakkar01 / Profile
This repository describes me
Language:JavaScript 4- amber
bradrushworth / amber
Visualise your Amber electricity consumption using this flutter dashboard.
Language:Dart 4 A Snakemake workflow for analyzing AMBER molecular dynamics simulations.
Language:Python 3konstantine-v / amber-ticketing
A ticketing application for use with clients. Created with the amber framework.
Language:Crystal 3tillsiebenmorgen / RS-REMD_tutorial
This is a tutorial to perform the lennard-jones parameter scaling for rs-remd (repulsive scaling remd) simulations for the amber package.
Language:Python 3
