two-photon

There are 0 repository under two-photon topic.

• HelmchenLabSoftware / Cascade

  Calibrated inference of spiking from calcium ΔF/F data using deep networks

  calcium-imagingdeconvolutionspike-detectiondeep-learningtwo-photon
  Language:Jupyter Notebook 100

• PerezOrtegaJ / Xsembles2P

  Tool to analyze two-photon calcium imaging videos, extract neuronal activity, and identify neuronal ensembles (ONsembles and OFFsembles).

  ensemblesmatlabneuronalrastertwo-photonoffsemblesonsembles
  Language:MATLAB 4

• cudmore / pie

  A Raspberry Pi Controlled Experiment (PiE). See documentation at https://cudmore.github.io/pie-doc

  behaviorflaskmousepythonraspberry-piraspberry-pi-cameratwo-photon
  Language:Jupyter Notebook 2

• cudmore / MapManager-Matlab

  Matlab class library to load, analyze, and extend Map Manager analysis.

  matlabigor-prospine-dynamicsintensity-analysistime-seriestwo-photon
  Language:MATLAB 1

• darikoneil / CalSciPy

  A collection of useful methods for handling, processing, and visualizing calcium imaging data.

  calciumcalcium-imagingcalscipyimage-processingimagingneurosciencepsychologypythonsciencetwo-photonvisualization
  Language:Python 1

• drchrisch / SynapseLocator

  Perform registration of 3D imaging data and localization of spots (synapses/boutons) in semi-automatic mode (with graphical user interface).

  two-photonscanimage3d-imagesimage-registrationsynapsemachine-learning
  Language:MATLAB 1

• Animadversio / 2p-V1-population-coding-data-analysis

  Analyzing 2p in vivo primate V1 population neural response to shapes and natural stimuli

  neurosciencevision-sciencedata-miningtwo-photonstatistical-learning
  Language:Jupyter Notebook

• atakehiro / line-registration

  reconstruct the scan image to modify the slipping to horizontal direction

  image-processingreconstructed-imagesmatlabimagej-pluginsscanning-microscopytwo-photon
  Language:Java

• cajal / microns-ta3

  MICrONS TA3 connectivity database

  neuroscienceconnectomicselectron-microscopy3d-segmentationtwo-photoncalcium-signalsdatajoint
  Language:Jupyter Notebook