Darik A O’Neil's repositories
Identification-of-Pattern-Completion-Neurons
Demo of Code: Identification of Pattern Completion Neurons in Neuronal Ensembles using Probabilistic Graphical Models, Journal of Neuroscience 2021
annotated_MIND
Python implementation of Manifold Inference from Neural Dynamics (MIND)
conditional_dispatch
Decorator for dispatching a function's implementation according to registered conditional statements. While using a similar syntax to python standard library's singledispatch, it supports arbitrary conditional statements on single or multiple input arguments.
decodanda
Decoding and geometrical analysis of neural activity with built-in best practices
fissa
A Python toolbox for Fast Image Signal Separation Analysis, designed for Calcium Imaging data.
PropAnalysisScripts
analysis scripts used in Nav1.1 is essential for proprioceptive signaling and motor behaviors, eLife 2022
slmsuite
Python package for high-performance spatial light modulator (SLM) control and holography.
Visual-Habituation-Behavioral-Task
Visual habituation behavioral task used in An increase in spontaneous activity mediates visual habituation, Cell Reports, 2022
SynapticSensorAnalysis
Script to Analyze Synaptic Optical Sensors
thundersvm
ThunderSVM: A Fast SVM Library on GPUs and CPUs
Wellplate-Mounted-LEDS
Code to Control Wellplate-Mounted LEDs