protein-structures

There are 0 repository under protein-structures topic.

awesome-cryoem
kuixu / awesome-cryoem
A collaborative list of awesome CryoEM (Cryo Electron Microscopy) resources.
cryo-em electron-microscopy density-map 3d-reconstruction 3d-denoise model-building protein-structures tomography cryoem
127
pymodproject / pymod
PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.
pymol bioinformatics sequence-alignments structural-alignments homology-modeling similarity-searches pymol-plugin protein-structures protein-sequences
Language:Python 71
HobnobMancer / cazy_webscraper
Web scraper to retrieve protein data catalogued by the CAZy, UniProt, NCBI, GTDB and PDB websites/databases.
cazy cazymes scraper cazy-family cazy-webscraper protein-sequences genbank protein-structures gtdb bioinformatics carbohydrates database enzymes genomics python
Language:Python 13
SergeiNikolenko / ImmunoPeptideDesigner
Automated generation of immunogenic peptides from protein structures and molecular docking analysis using AlphaFold2 and AutodockVina.
alphafold2 bioinformatics molecular-docking protein-structures python autodockvina immunogenic-peptides peptide-design
Language:Jupyter Notebook 1
taherimo / kludo
Diffusion Kernel-based Graph Node Clustering for Protein Domain Assignment
protein-domain-identification python-3 protein-structures diffusion-kernels graph
Language:Python 1
WeronikaJargielo / protein-interaction-finder
ProteinInteractionFinder (PIF) is a Java 11 library for determining interatomic interactions in protein structures, obtained from PDB (Protein Data Bank) files.
interatomic-interactions protein-structures pif pdb identification intraprotein-interactions protein-interaction-finder
Language:Java 1
annasu1225 / Carl_Chr20_Analysis
Yale Gradute School module CBB752 final group project by Jiaqi Li, Keyi Li, and Anna Su.
personal-genomics protein-structures
Language:Jupyter Notebook 0
raph333 / Consensus-residue-contact-calculator
Identify residue contacts shared across all or most protein structures of a give protein family
protein-structures protein-family pdb
Language:Python 0

protein-structures

kuixu / awesome-cryoem

pymodproject / pymod

HobnobMancer / cazy_webscraper

SergeiNikolenko / ImmunoPeptideDesigner

taherimo / kludo

WeronikaJargielo / protein-interaction-finder

annasu1225 / Carl_Chr20_Analysis

raph333 / Consensus-residue-contact-calculator