outbreaks

There are 0 repository under outbreaks topic.

• R4EPI / sitrep

  Report templates and helper functions for applied epidemiology

  r-packagereport-generatorepidemiologyoutbreaksmsf
  Language:R 39

• reconhub / learn

  RECON learn: a free, open platform for training material on epidemics analysis

  rmarkdownblogdownlockedatareconoutbreakswebsitewebsiteshtmlwidgets
  Language:HTML 35

• outbreak-info / outbreak.info

  During outbreaks of emerging diseases such as COVID-19, efficiently collecting, sharing, and integrating data is critical to scientific research. outbreak.info is a resource to aggregate all this information into a single location.

  emerging-diseasesoutbreaks
  Language:Vue 29

• covid-19-Re / estimateR

  R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic

  covid-19epidemiologyoutbreaks
  Language:R 10

• epiverse-trace / linelist

  R package for handling linelist data

  dataoutbreaksrstructured-datadata-structuresepidemiologyr-packageepiversesdg-3
  Language:R 8

• epiverse-trace / simulist

  An R package for simulating line lists

  epidemiologyepiverselinelistoutbreaksrr-package
  Language:R 4

• reconhub / recon-helpdesk

  Open an issue in this repository if you have general questions about RECON packages

  epidemiologyhelpdeskreconoutbreaks
  3

• nfidd / nfidd

  Course on nowcasting and forecasting of infectious disease dynamcis

  epidemicsforecastinglearningnowcastingoutbreak-analysisoutbreaksdelay-estimationinfectious-disease-dynamics
  Language:HTML 2

• izabelalvares / MarburgVirus

  This geospatial project maps Marburg virus transmission, a zoonotic disease with high case fatality rates in Africa. It highlights the need for medical treatment, isolation, and quarantine measures. Vaccines and contact tracing can limit the global spread of epidemics

  outbreakmarburgvirusafricacase-fatality-ratecontact-tracingepidemicglobal-healthinfectious-diseaseisolationoutbreakspublic-healthquarantinevaccinevaccine-developmentzoonotic-diseasehemorrhagic-fevermarburg-virusvirus-transmission
  Language:Python 1

• wdzajicek / cdc-rss

  Latest outbreaks & news releases from CDC.gov

  cdcdiseaseoutbreaksrssrss-feeddisease-spread
  Language:SCSS 1

• outbreaksci / rapid-reviews

  Rapid, open reviews of outbreak science preprint manuscripts.

  outbreakspreprintspeer-reviewsscience
  0

• Paalpha / ebola_out_simulation

  Simulated data and experiments for the use of machine learning in outbreak parameter (CFR) estimation.

  outbreaksmachinelearningcasefatalityratiosepidemiology
  Language:R 0

• QIDSOD / QIDSOD-documentation

  Documentation related to the project "Quantifying the Impact of Data Sharing on Outbreak Dynamics" (QIDSOD)

  datasharingdata-sciencecovid-19covid19sars-cov-2sarscov2public-healthoutbreak-data-analysisoutbreaksdata-sharingdata-integrationepidemiological-investigationepidemiologynext-pandemicdocumentationoutbreak-dynamicsoutbreakoutbreak-severity
  0

• sempwn / cr0eso

  Bayesian SEIR model fitting to multiple facility outbreaks

  r0-estimationoutbreakscovid-19bayesian-inference
  Language:R 0

• avallecam / incidenceflow

  incidenceoutbreakstidyverseworkflow
  Language:R