node-embedding

There are 8 repositories under node-embedding topic.

awesome-graph-classification
benedekrozemberczki / awesome-graph-classification
A collection of important graph embedding, classification and representation learning papers with implementations.
graph2vec classification-algorithm graph-kernels weisfeiler-lehman kernel-methods deep-graph-kernels netlsd graph-attention-model graph-attention-networks structural-attention attention-mechanism graph-kernel node2vec graph-embedding network-embedding node-embedding graph-representation-learning deepwalk graph-convolutional-networks graph-classification
Language:Python 4723
pytorch_geometric_temporal
benedekrozemberczki / pytorch_geometric_temporal
PyTorch Geometric Temporal: Spatiotemporal Signal Processing with Neural Machine Learning Models (CIKM 2021)
pytorch graph-neural-networks temporal-networks temporal-graphs gcn graph-convolutional-networks deep-learning network-science temporal-data node-embedding network-embedding graph-embedding spatial-data spatial-analysis spatio-temporal-data spatio-temporal-analysis gnn graph-convolution spatiotemporal
Language:Python 2577
karateclub
benedekrozemberczki / karateclub
Karate Club: An API Oriented Open-source Python Framework for Unsupervised Learning on Graphs (CIKM 2020)
community-detection graph-clustering deepwalk networkx louvain network-science machine-learning unsupervised-learning gcn node2vec graph2vec supervised-learning sklearn networkx-graph scikit label-propagation graph-embedding network-embedding node-embedding 2vec
Language:Python 2113
dsgiitr / graph_nets
PyTorch Implementation and Explanation of Graph Representation Learning papers: DeepWalk, GCN, GraphSAGE, ChebNet & GAT.
graph-representation-learning graph-convolutional-networks graph-attention-networks graph-embedding deepwalk node-embedding graph-sage chebyshev-polynomials pytorch
Language:Jupyter Notebook 1116
graph2vec
benedekrozemberczki / graph2vec
A parallel implementation of "graph2vec: Learning Distributed Representations of Graphs" (MLGWorkshop 2017).
graph2vec subgraph2vec graph-wavelet graph-embedding node-embedding deepwalk word2vec node2vec struc2vec graph-kernel weisfeiler-lehman kernel matrix-factorization implicit-matrix-factorization noise-contrastive-estimation diff2vec gemsec machine-learning unsupervised-learning transformer
Language:Python 887
littleballoffur
benedekrozemberczki / littleballoffur
Little Ball of Fur - A graph sampling extension library for NetworKit and NetworkX (CIKM 2020)
graph graph-sampling network-sampling random-walk forest-fire node-embedding network-embedding minimum-spanning-tree graph-embedding sampling metropolis-hastings network-science network-analytics deep-learning machine-learning graph-sparsification graph-algorithms networkx community-structure
Language:Python 695
datasets
benedekrozemberczki / datasets
A repository of pretty cool datasets that I collected for network science and machine learning research.
network-science network-analysis data-science machine-learning gcn graph-embedding network-embedding community-detection link-prediction node-classification graph-convolution node-embedding graph-neural-network gnn dimensionality-reduction deepwalk node2vec graph2vec benchmark dataset
599
APPNP
benedekrozemberczki / APPNP
A PyTorch implementation of "Predict then Propagate: Graph Neural Networks meet Personalized PageRank" (ICLR 2019).
gcn pytorch graph-convolutional-neural-networks graph-neural-network research machine-learning deep-learning deepwalk node2vec graph-attention attention pagerank graph-classification graph-embedding node-embedding iclr deep-neural-networks ppnp network-embedding appnp
Language:Python 359
Splitter
benedekrozemberczki / Splitter
A Pytorch implementation of "Splitter: Learning Node Representations that Capture Multiple Social Contexts" (WWW 2019).
deepwalk pytorch node2vec gensim ego-splitting machine-learning word2vec factorization implicit-factorization deep-learning deep-neural-network graph-neural-network node-embedding community-detection overlapping-community-detection clustering network-embedding graph-embedding word-vector graph-representation-learning
Language:Python 211
DANMF
benedekrozemberczki / DANMF
A sparsity aware implementation of "Deep Autoencoder-like Nonnegative Matrix Factorization for Community Detection" (CIKM 2018).
deep-learning autoencoder machine-learning data-science clustering community-detection nmf deepwalk node2vec mnmf gemsec coordinate-descent danmf node-embedding word2vec embedding sklearn cikm unsupervised-learning dimensionality-reduction
Language:Python 202
role2vec
benedekrozemberczki / role2vec
A scalable Gensim implementation of "Learning Role-based Graph Embeddings" (IJCAI 2018).
gensim struc2vec deepwalk node2vec network-embedding graph-embedding node-embedding pytorch tensorflow machine-learning research sklearn weisfeiler-lehman graph-neural-network deep-learning graph-wavelet network-science representation-learning word2vec implicit-factorization
Language:Python 165
MUSAE
benedekrozemberczki / MUSAE
The reference implementation of "Multi-scale Attributed Node Embedding". (Journal of Complex Networks 2021)
musae attributed-embedding node-embedding graph-embedding network-embedding gensim deepwalk node2vec tadw asne aane word2vec asonam walklets gemsec embedding network-analysis deep-learning implicit-factorization graph-neural-network
Language:Python 152
diff2vec
benedekrozemberczki / diff2vec
Reference implementation of Diffusion2Vec (Complenet 2018) built on Gensim and NetworkX.
diff2vec deepwalk node2vec struc2vec gensim tensorflow unsupervised-learning graph-embedding node-embedding network-embedding embedding factorization diffusion implicit-factorization machine-learning deep-learning semisupervised-learning neural-network complex-networks embeddings
Language:Python 124
VGraphRNN / VGRNN
Variational Graph Recurrent Neural Networks - PyTorch
variational-autoencoder graph-auto-encoder representation-learning variational-inference graph-convolutional-networks graph-embedding node-embedding graph-neural-networks graph-neural-network variational-autoencoders graph-representation-learning dynamic-graphs link-prediction
Language:Python 111
walklets
benedekrozemberczki / walklets
A lightweight implementation of Walklets from "Don't Walk Skip! Online Learning of Multi-scale Network Embeddings" (ASONAM 2017).
embedding deepwalk walklet multiscale node-embedding graph-embedding machine-learning dimensionality-reduction word2vec node2vec graphlet word-embedding node-classification edge-prediction dont-walk-skip graph-mining gensim graph-neural-networks graph-convolution deep-learning
Language:Python 102
tigerlily
benedekrozemberczki / tigerlily
TigerLily: Finding drug interactions in silico with the Graph.
node embedding node-embedding graph-embedding ddi drug-drug-interaction gradient-boosting graph pharmaceuticals network-science biology heterogeneous-graph knowledge-graph deep-learning machine-learning unsupervised-learning tigergraph graph-database graph-machine-learning
Language:Jupyter Notebook 97
GemsLab / REGAL
Representation learning-based graph alignment based on implicit matrix factorization and structural embeddings
representation-learning network-embedding network-alignment matrix-factorization scalability graph-matching node-embedding
Language:Python 92
ASNE
benedekrozemberczki / ASNE
A sparsity aware and memory efficient implementation of "Attributed Social Network Embedding" (TKDE 2018).
node2vec deepwalk node-embedding graph-embedding network-embedding word2vec aane asne tensorflow embedding 2vec attributed-embedding diff2vec gemsec attributed dimensionality-reduction data-science representation-learning factorization feature-extraction
Language:Python 81
SINE
benedekrozemberczki / SINE
A PyTorch Implementation of "SINE: Scalable Incomplete Network Embedding" (ICDM 2018).
aane asne deep-learning deepwalk dimensionality-reduction gensim graph-embedding grarep machine-learning network-embedding networkx node-embedding node2vec pytorch sklearn tadw tensorflow torch unsupervised-learning walklets
Language:Python 71
TENE
benedekrozemberczki / TENE
A sparsity aware implementation of "Enhanced Network Embedding with Text Information" (ICPR 2018).
deep-learning network-embedding machine-learning node-embedding attributed-embedding deepwalk node2vec graph-convolution graph-neural-network matrix-factorization implicit-factorization feature-extraction pattern-recognition asne tadw tensorflow pytorch graph-embedding matrix-decomposition node-classification
Language:Python 71
abhilash1910 / SpectralEmbeddings
spectralembeddings is a python library which is used to generate node embeddings from Knowledge graphs using GCN kernels and Graph Autoencoders. Variations include VanillaGCN,ChebyshevGCN and Spline GCN along with SDNe based Graph Autoencoder.
gcn tf spectral chebyshev-polynomials gcn-filter vanillagcn spline sdne node-embedding tensorflow2
Language:HTML 66
benedekrozemberczki / RolX
An alternative implementation of Recursive Feature and Role Extraction (KDD11 & KDD12)
deepwalk node2vec rolx refex struc2vec word2vec gensim tensorflow unsupervised-learning graph-embedding node-embedding factorization implicit-factorization structural-embedding machine-learning deep-learning semisupervised-learning matrix-factorization embedding graph-mining
Language:Python 64
GraRep
benedekrozemberczki / GraRep
A SciPy implementation of "GraRep: Learning Graph Representations with Global Structural Information" (WWW 2015).
deepwalk node2vec role2vec grarep walklets asne aane tadw graph-embedding node-embedding network-embedding embedding gensim svd singular-value-decomposition word2vec graph2vec deep-learning matrix-factorization nmf
Language:Python 61
TADW
benedekrozemberczki / TADW
An implementation of "Network Representation Learning with Rich Text Information" (IJCAI '15).
node-embedding graph-embedding deepwalk node2vec tadw gensim network-embedding nmf embedding machine-learning unsupervised-learning data-mining text-mining matrix-factorization word2vec factorization awesome attributed-embedding data-science 2vec
Language:Python 55
FEATHER
benedekrozemberczki / FEATHER
The reference implementation of FEATHER from the CIKM '20 paper "Characteristic Functions on Graphs: Birds of a Feather, from Statistical Descriptors to Parametric Models".
node-embedding graph-embedding network-embedding deep-learning node-classification graph-classification machine-learning data-mining networkx graph-convolution graph2vec deepwalk node2vec deep-neural-networks neural-network graph-kernel graph tensorflow pytorch representation-learning
Language:Python 43
joshpxyne / deep-hyperedges
New Algorithms for Learning on Hypergraphs
hypergraphs deep-learning graphs random-walk node-embedding hyperedge-embedding
Language:Jupyter Notebook 38
BoostedFactorization
benedekrozemberczki / BoostedFactorization
An implementation of "Multi-Level Network Embedding with Boosted Low-Rank Matrix Approximation" (ASONAM 2019).
deepwalk l-ensnmf nmf boosting gradient-boosting-machine boosting-machine nmf-decomposition matrix-factorization sklearn boostedne network-embedding node-embedding node2vec word2vec dimensionality-reduction unsupervised-learning machine-learning data-mining factorization-machine gradient-boosting
Language:Python 33
daiquocnguyen / Caps2NE
A Capsule Network-based Model for Learning Node Embeddings (CIKM 2020)
node-embedding graph-embedding node-classification capsule-network capsule-neural-networks unsupervised-graph-embedding unsupervised-node-embedding network-embedding graph-neural-network
Language:Python 24
benedekrozemberczki / OrbitalFeatures
A sparsity aware implementation of "Biological Network Comparison Using Graphlet Degree Distribution" (Bioinformatics 2007)
motif node2vec deepwalk orbit graphlet centrality clustering-coefficient graph-enumeration sklearn research machine-learning network-science complex-networks feature-extraction data-science bioinformatics graph-classification node-embedding node-classification role2vec
Language:Python 21
resolutions-2019
benedekrozemberczki / resolutions-2019
A list of data mining and machine learning papers that I implemented in 2019.
machine-learning deep-learning graph-convolutional-networks gcn graph-clustering network-embedding node-embedding graph-embedding network-science pytorch tensorflow scipy sklearn attention-mechanism deepwalk node2vec graph-classification node-classification graph-kernel resolution
20
benedekrozemberczki / FSCNMF
An implementation of "Fusing Structure and Content via Non-negative Matrix Factorization for Embedding Information Networks".
deepwalk node2vec nmf machine-learning data-mining pca word2vec fscnmf analytics factorization-machine regularization network-embedding node-embedding graph-embedding embedding artifical-intelligence information-network graph2vec word2vec-model data-science
Language:Python 18
manoelhortaribeiro / GraphSageHatefulUsers
Simple reference implementation of GraphSAGE.
node-embedding deep-learning graph-neural-networks
Language:Python 16
SINr-Embeddings / sinr
The SINr approach to train interpretable word and graph embeddings
2vec community-detection interpretability louvain machine-learning network-embedding network-science node-embedding word-embedding
Language:Jupyter Notebook 14
AstraZeneca / NESS
Official implementation of "NESS: Node Embeddings from Static Subgraphs"
contrastive-learning graph graph-auto-encoder link-prediction node-embedding self-supervised-learning subgraph
Language:Python 12
XiaShan1227 / Graphormer
Do Transformers Really Perform Bad for Graph Representation? [NIPS-2021]
attention-mechanism deep-learning edge-embedding node-embedding self-attention transformer
Language:Python 12
benedekrozemberczki / GRAF
Inner product natural graph factorization machine used in 'GEMSEC: Graph Embedding with Self Clustering' .
deepwalk node2vec struc2vec word2vec tensorflow unsupervised-learning graph-embedding node-embedding factorization implicit-factorization machine-learning semisupervised-learning matrix-factorization clustering graph embedding structural-embedding community community-detection
Language:Python 10

node-embedding

benedekrozemberczki / awesome-graph-classification

benedekrozemberczki / pytorch_geometric_temporal

benedekrozemberczki / karateclub

dsgiitr / graph_nets

benedekrozemberczki / graph2vec

benedekrozemberczki / littleballoffur

benedekrozemberczki / datasets

benedekrozemberczki / APPNP

benedekrozemberczki / Splitter

benedekrozemberczki / DANMF

benedekrozemberczki / role2vec

benedekrozemberczki / MUSAE

benedekrozemberczki / diff2vec

VGraphRNN / VGRNN

benedekrozemberczki / walklets

benedekrozemberczki / tigerlily

GemsLab / REGAL

benedekrozemberczki / ASNE

benedekrozemberczki / SINE

benedekrozemberczki / TENE

abhilash1910 / SpectralEmbeddings

benedekrozemberczki / RolX

benedekrozemberczki / GraRep

benedekrozemberczki / TADW

benedekrozemberczki / FEATHER

joshpxyne / deep-hyperedges

benedekrozemberczki / BoostedFactorization

daiquocnguyen / Caps2NE

benedekrozemberczki / OrbitalFeatures

benedekrozemberczki / resolutions-2019

benedekrozemberczki / FSCNMF

manoelhortaribeiro / GraphSageHatefulUsers

SINr-Embeddings / sinr

AstraZeneca / NESS

XiaShan1227 / Graphormer

benedekrozemberczki / GRAF