drug-drug-interaction

There are 8 repositories under drug-drug-interaction topic.

kexinhuang12345 / DeepPurpose
A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)
bioinformatics covid19 ddi deep-learning drug-discovery drug-drug-interaction drug-property-prediction drug-repurposing drug-target-interaction drug-target-interactions dti-prediction ppi protein-function-prediction protein-protein-interaction qsar repurposing-drugs side-effects toolkit virtual-screening
Language:Jupyter Notebook 927
tigerlily
benedekrozemberczki / tigerlily
TigerLily: Finding drug interactions in silico with the Graph.
node embedding node-embedding graph-embedding ddi drug-drug-interaction gradient-boosting graph pharmaceuticals network-science biology heterogeneous-graph knowledge-graph deep-learning machine-learning unsupervised-learning tigergraph graph-database graph-machine-learning
Language:Jupyter Notebook 97
awesome-drug-pair-scoring
AstraZeneca / awesome-drug-pair-scoring
Readings for "A Unified View of Relational Deep Learning for Drug Pair Scoring." (IJCAI 2022)
ddi drug-synergy synergy-prediction deep-chemistry chemistry polypharmacy deep-learning machine-learning relational-learning drug-combination drug-drug-interaction drug-repurposing drug-design drug-target-interactions drug gcn gnn knowledge-graph graph-neural-network decagon
85
yueyu1030 / SumGNN
[Bioinformatics 2021] This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summarization'.
bioinformatics biomedical-knowledge-graph biosnap drug-discovery drug-drug-interaction drugbank gnn graph-neural-networks knowledge-graph subgraph twosides
Language:Python 78
matenure / mvGAE
Drug Similarity Integration Through Attentive Multi-view Graph Auto-Encoders (IJCAI 2018)
graph-convolutional-networks gcn graph auto-encoder multi-view drug-similarity ddi drug-drug-interaction
Language:Python 32
codeKgu / BiLevel-Graph-Neural-Network
Bi-Level Graph Neural Networks for Drug-Drug Interaction Prediction. ICML 2020 Graph Representation Learning and Beyond (GRL+) Workshop
graph-convolutional-networks graph-attention-networks drug-drug-interaction icml covid-19 drugbank graph-neural-networks deep-learning representation-learning
Language:Python 27
nrohani / NDD
Drug-Drug Interaction Predicting by Neural Network Using Integrated Similarity
drug-similarities neural-network deep-neural-networks ndd drug-discovery drug-drug-interaction drug-target-interactions predictive-modeling neural-networks similarity similarity-measures snf
Language:Python 27
LARS-research / EmerGNN
Emerging Drug Interaction Prediction Enabled by Flow-based Graph Neural Network with Biomedical Network. Nature Computational Science. 2023.
biomedical-networks drug-drug-interaction graph-neural-networks
Language:Python 18
deep-purpose-tutorial
ssiddhantsharma / deep-purpose-tutorial
Repository for the HackBio'2021 Internship for Team Drug-Development-A
drug-discovery bioinformatics toolkit deep-learning drug-repurposing drug-design drug-target-interactions drug-drug-interaction drug-targets cheminformatics tutorial
Language:Jupyter Notebook 11
nrohani / ISCMF
ISCMF: Integrated Similarity-Constrained Matrix Factorization for Drug-Drug Interaction Prediction
drugs iscmf drug-discovery drug-drug-interaction drugbank similarity-measures matrix-factorization manifold-learning drug-repurposing drug drug-target-interactions drug-design bioinformatics machine-learning matrix-decompositions link-prediction classification drug-similarity feature-extraction
Language:Python 6
thisishe / predict_ddi
Novel deep learning model for more accurate prediction of drug-drug interaction effects
deeplearning autoencoder bioinformatics drug-drug-interaction
Language:Python 6
kbogas / DDI_BLKG
Drug-Drug Interaction Prediction on a Biomedical Literature Knowledge Graph
knowledge-graph drug-drug-interaction link-prediction biomedical reproducible-research
Language:Python 4
hitesh19426 / ddinter-main
A next-js app to check interactions between drugs.
bootstrap5 formik mongodb-atlas nextjs drug-drug-interaction
Language:JavaScript 3
albertrial / SemEval-2013-task-9
Recognition of drugs and extraction of drug-drug interactions that appear in biomedical literature.
nlp nlp-machine-learning rule-based-nlp semeval drug-drug-interaction
Language:Jupyter Notebook 2
aminkhod / DDI-Project
drug-discovery drug-drug-interaction deep-learning bioinformatics machine-learning data-science
Language:Jupyter Notebook 2
larngroup / One_Shot_Siamese_Net_Drug_Discovery
drug drug-discovery drug-drug-interaction drug-target-interactions siamese-neural-network one-shot-learning
Language:Python 2
AIMedLab / BioNEV
Graph Embedding Evaluation / Code and Datasets for "Graph Embedding on Biomedical Networks: Methods, Applications, and Evaluations"
drug-disease-associations drug-drug-interaction graph-embedding link-prediction node-classification protein-function-prediction protein-protein-interaction semantic-type-detection
Language:Python 1
albert-espin / drug-interactions
Extraction of Drug-Drug Interactions from Biomedical Texts
ddi drug-discovery drug-drug-interaction biomedical biomedical-named-entity-recognition nlp natural-language-processing natural-language-understanding crf conditional-random-fields neural-network neural-networks deep-learning machine-learning artificial-intelligence ai cnn convolutional-neural-networks recurrent-neural-networks named-entity-recognition
1
Bala-periannan / Pharmacovigilance-clinical-database
This is a new repositiory. I'm interested in creating a cloud-based Saas program that utilizes an open-source clinical database.
clinical-research clinical-trials drug-drug-interaction drugs pharmacokinetics pharmacology saas-application pharmacovigilance
1
butrinto / VR-Experience
A Virtual Reality Experience - Project to examine the productivity and usefulness of Virtual Reality as a tool for education
drug-drug-interaction educational-game educational-project educational-software virtual-reality virtual-reality-experiences virtual-reality-game
Language:C# 1
m0hssn / ADEP
bioinformatics deep-learning drug-drug-interaction
Language:Python 1
BuddyDriver
mrcraigo / BuddyDriver
app for drug drivers to log drug use to determine when they can legally drive again
driver drivers-license drug drug-drug-interaction dui police police-data police-re police-req
1
pipetcpt / DallphinDDI
Drugs with Allometry and Physiology Inside - Drug Drug Interaction
drug-drug-interaction pharmacokinetics pharmacology clinical-pharmacology
1
tpham2580 / drugNfo
Web App that checks if any of the added medications have interactions with each other. Created as portfolio project for Web Dev course.
javascript medicine drug-drug-interaction
Language:JavaScript 1
AspirinCode / Molormer
Molormer:A Lightweight Self-Attention-Based Method Focused on Spatial Structure of Molecular Graph for Drug-Drug Interactions Prediction
drug-drug-interaction
Language:Python 0
bio-ontology-research-group / D4
Deep drug-drug interaction discovery and demystification (D4)
artificial-intelligence drug-drug-interaction knowledge-graph machine-learning ontology
Language:Python 0
prince-css / semrep
Factuality check of the SemRep Predications
bert drug-discovery drug-drug-interaction electra few-shot-learning gpt-35-turbo in-context-learning llama2 llm-finetuning longformer nlp openai peft python pytorch roberta t5
Language:Jupyter Notebook 0
pwatrick / ddiwas
bioinformatics computational-biology electronic-health-record biomedical-data-science biomedical-informatics drug-drug-interaction
Language:R 0
amanzadi / PSE
An easy-to-use Deep Learning tool for Polypharmacy Side Effect prediction.
bioinformatics deep-learning drug-discovery drug-drug-interaction drug-protein-interactions graph-neural-networks polypharmacy side-effects ddi drug-pair gcn smiles
Language:Jupyter Notebook
Deceptrax123 / Drug-Drug-Interaction-Dataloader
PyTorch code for an effective way of making a Molecular Graph Dataset in Torch Geometric involving a pair of graphs from chemical SMILE strings
chemical-reactions gnns graph-neural-networks graphs pytorch torch-geometric deep-learning graph-datasets dataloader dataset drug-drug-interaction
Language:Python
GiselaMD / DDI-Extraction
Drug drug interaction using LSTM and word embedding
lstm-neural-networks ddi-extraction drug-drug-interaction word-embeddings
Language:Jupyter Notebook