morphometrics

There are 2 repositories under morphometrics topic.

• pysal / momepy

  Urban Morphology Measuring Toolkit

  urbanmorphologymorphological-analysismorphometricsurban-morphometricsurban-street-networks
  Language:Python 453

• benchmark-urbanism / cityseer-api

  Computational tools for urban analysis

  urban-planningarchitecturenetwork-analysisspatial-analysisnetworkxgeographical-information-systemopenstreetmapspatial-dataspatial-data-analysisnetwork-topologypython3networksshapelynumpynumbalandusecentralitynetwork-centralitiesosmnxmorphometrics
  Language:Python 87

• MomX / Momocs

  :dove: Morphometrics using R

  morphometricsr
  Language:HTML 50

• vaipatel / morphops

  Geometric Morphometrics in Python

  morphometricsprocrustesthin-plate-splines
  Language:Python 26

• alihashmiii / Elliptical-Fourier-Descriptors

  elliptical fourier descriptors with and without lobe contributions

  computer-visionmathematicamorphometricsshape-descriptor
  Language:Mathematica 13

• EcologicalTraitData / ETS

  A Data Standard for Ecological Trait Datasets

  trait-ontologyecologytraitscommunity-ecologymorphometrics
  Language:HTML 10
• t4gpd

  thomas-leduc / t4gpd

  Set of tools based on Python, GeoPandas and Shapely to achieve urban geoprocessing

  urban-analyticsmorphological-analysismorphometrics
  Language:Python 7

• noshita / ktch

  Model-based morphometrics in Python

  morphometricspython
  Language:Python 6

• shaharkov / GPLmkBDMatch

  A Matlab implementation accompanying the paper "Gaussian Process Landmarking on Manifolds".

  geometry-processingmorphometricsbounded-distortion
  Language:MATLAB 6

• cjabradshaw / CoelacanthEvolution

  Analyses of coelacanth morphometrics, disparity, phylogeny, and rate of evolution

  coelacanthevolutionmachine-learningpalaeontologyresamplingmorphometricsphylogeneticsbeastpaupdisparityactinistiasarcopterygii
  Language:R 5

• millacarmona / morphospace

  A package for people who can’t visualize morphospaces good and who wanna learn to do other geometric morphometrics stuff good too.

  morphometrics
  Language:R 5

• alihashmiii / Force-Inference

  implementation of the Bayesian Force Inference technique based on the work of Ishihara and Sugimura

  force-inferencemorphometricsmorphometrybiophysicswolfram-languagemathematicawolfram-mathematica
  Language:Mathematica 4

• timcdlucas / paleomorph

  Geometric Morphometric Tools for Paleobiology

  paleobiologymorphometricsprocrustesstatistical-analysis
  Language:R 4

• MomX / Momacs

  :hammer_and_wrench: Interactive acquisition of morphometrics data

  rmorphometrics
  Language:HTML 3

• MomX / MomX

  :ring: Easily install and load MomX packages

  rmorphometrics
  Language:R 3

• ElsevierSoftwareX / SOFTX-D-20-00032

  Meander Statistics Toolbox (MStaT), is a packaging of codes developed on MATLAB, which allows the quantification of parameters descriptors of meandering channels (sinuosity, arc-wavelength, amplitude, curvature, inflection point, among other). To cite this software publication: https://www.sciencedirect.com/science/article/pii/S2352711021000194

  morphometricsmigration-patternswavelet-filter
  Language:MATLAB 2

• kiwijuliandale / DJI_PH4_LaserAltimeter

  DJI Phantom 3/4 laser altimeter installation

  djidji-phantom-4dji-phantom-3laser-altimeterphotogrammetrymorphometricsmorphometrixmarrs-labdukeduke-university
  Language:C 2

• psolymos / EDMAinR

  Euclidean Distance Matrix Analysis in R

  morphometricsmultivariate-statisticscomparing-biological-shapescoordinate-freelandmark-data
  Language:R 2

• timcdlucas / EMMLi

  A Maximum Likelihood Approach To The Analysis Of Modularity

  paeleobiologymorphometricsmodularity
  Language:R 2

• alihashmiii / curvatureMeasure

  for measuring curvature along the boundary of an image object

  curvaturemathematicawolfram-mathematicawolfram-languagemorphometricsmorphometry
  Language:Mathematica 1

• josegcpa / wbs-prediction

  Code repository for project focusing on blood cell detection and diagnostic prediction from peripheral blood slides

  bioimage-analysisdeep-learningimage-analysismachine-learningmorphometrics
  Language:R 1

• MomX / Momecs

  :bear: Morphometric (and multivariate) explorer controlled by shiny

  rmorphometrics
  Language:R 1

• MomX / Momit

  :honey_pot: Definition and utils for .mom, a minimalist file format for morphometrics data.

  rmorphometrics
  Language:PLSQL 1

• Riverscapes / pyGUT

  Geomorphic Unit Toolkit (GUT) - Python version

  geomorphic-unitsgeomorphologymorphological-analysismorphometricsriverscapestopography
  Language:Python 1

• seldenlab / perdiz3

  Perdiz arrow points from Caddo burial contexts aid in defining discrete behavioral regions

  archaeologyarcheologyamerican-southeastcaddolithicsstone-toolsmorphometricsmachine-learningtexas
  Language:TeX 1

• flyconnectome / tools

  Overview of neuroscience tools developed in the Fly Connectomics group (University of Cambridge) and the Jefferis lab (MRC-LMB)

  neurosciencetoolsmorphometricsrpythonneuroanatomy
  0

• ivnols / oto_morpho_geo

  Repositório para organizar os arquivos de landmark e cuvas das análises morfológicas dos otólitos para definir indicadores ecológicos nessas estruturas.

  morphological-analysismorphometricsotolith-images
  Language:PLSQL 0

• mattiaghilardi / MorFishJ

  A software package for fish traditional morphometric analysis from side view images

  morphometricsfishimagejfunctional-traits
  Language:ImageJ Macro 0

• nnbuainain / bird_morphometric_analyses

  Analyses to differentiate birds species of the Tunchiornis genus with statistics and ML (clustering)

  statisticsrmachine-learningclusteringmorphometricstaxonomydata-science
  Language:R 0

• onnonuro / hifuku

  biopsymorphometricsnerveneurologyneuropathology
  Language:Jupyter Notebook 0

• Osooluwatobia / cucurbitaceae-morpholeaf

  Cucurbitaceae Leaves Morphometric Data and Code

  morphometricsshape-analysisbotanical-digitizationmorpholeaf
  Language:R 0

• watanabe-j / avrevol

  R package for average evolvability measures

  evolutionary-biologymorphometricsquantitative-geneticsrr-package
  Language:R 0

• watanabe-j / eigvaldisp

  R package for statistics of eigenvalue dispersion indices

  correlation-matrixcovariance-matrixeigenvaluesevolutionary-biologymorphometricsrr-package
  Language:R 0

• watanabe-j / eigvaldispRcpp

  Rcpp extension of eigvaldisp

  evolutionary-biologymorphometricsrr-packagercpp
  Language:C++ 0

• alejandroescobar264 / morfometria_craneos

  Adquisición y Análisis de Datos Morfométricos Craneales Multidimensionales

  arduinobatmorphometricsopenscanmolossuss
  Language:HTML

• asyafiqe / landmark-free-morphometry-docker

  Docker container for Landmark-free Morphometry code from A landmark-free morphometrics pipeline for high-resolution phenotyping: application to a mouse model of Down syndrome paper

  ct-scandockerlandmark-freemorphometrics
  Language:Dockerfile