Ali Hashmi's repositories
UNet-Segmentation-Wolfram
neural network for obtaining binarized mask for objects in grayscale images
Elliptical-Fourier-Descriptors
elliptical fourier descriptors with and without lobe contributions
3D-Vertex-Model
vertex model implementation to simulate biological tissue in 3D
2D-vertex-model
vertex model for simulating two-dimensional epithelial tissues
Force-Inference
implementation of the Bayesian Force Inference technique based on the work of Ishihara and Sugimura
Lineage-Mapper
an overlap based cell-tracker based on Chalfoun et al, Nat. Sci. Rep. 2016
3D-Segmentation-of-Cell-Nuclei
segment cell nuclei in a 3-D cluster
Autocorrelation-and-Crosscorrelations
1D and 2D auto/cross correlations in wolfram
cellular-potts-model
a mathematica implementation of the cellular-potts model
curvatureMeasure
for measuring curvature along the boundary of an image object
custom-wolfram-functions-and-misc-notes
custom functions for research and misc
Mean-Gaussian-Curvature
compute Gaussian and Mean Curvature
numeric_symbolic_schemes
mathematica notebooks for solving numerical and symbolic problems (PDEs, FEM, Optimisation)
Nematic-Defect
compute nematic defects from images
2D-Hydrophilic-Hydrophobic-Sequence-Folding
favourable energy states of a 2D hydrophilic/phobic string
alihashmiii
github profile
BayesianForceInference
Bayesian force inference in epithelial tissue
bond-orientational-order
determine local crystalline domains in agglomerates
computer-related-stuff
things that are important and can save time
Spheroid-Simulation
code based on a study "https://journals.aps.org/prx/pdf/10.1103/PhysRevX.8.021025"
tvm
3D Vertex Model
WolframLanguageForJupyter
Wolfram Language kernel for Jupyter notebooks