microsatellite

There are 0 repository under microsatellite topic.

• Mercury-GS

  Open-Source-Satellite / Mercury-GS

  An Open Source Program that allows users to interact with a Spacecraft in a lab environment, pre-launch.

  spacecraftground-stationcubesatsatellitespacemicrosatellitemicrosatellitestestingtelemetryopen-source
  Language:Python 42

• lmdu / krait

  An ultrafast tool for genome-wide survey of microsatellites and primer design

  microsatellitetandemrepeatsprimer
  Language:HTML 35

• kohyamat / massgenotyping

  Python package for microsatellite genotyping from highly multiplexed amplicon sequencing data

  genotypingmicrosatellitenext-generation-sequencingamplicon-sequencing
  Language:Python 7

• lmdu / pytrf

  a python package for finding tandem repeats from genomic sequences

  microsatelliteminisatellitessrvntrtandemrepeatsstr
  Language:C 6
• bhedi

  pranjalpruthi / bhedi

  βHΞDI (Biomarker-based Heuristic Engine for Dengue Identification) is a computational tool designed for the identification of Dengue virus serotypes in wastewater next-generation sequencing data.

  bioinformaticsbiomarker-discoverybiomarkersdask-dataframesdata-sciencegokmermetagenomicsmicrosatellitepalindrome
  Language:Go 2

• fcunial / Revant

  De novo repeat inference from long reads

  repeatsde-novo-assemblypacbio-datatransposonmicrosatellite
  Language:Java 0

• microsatellites / MSBench

  Build benchmark for microsatellite genotyping with HGSVC assembly contigs

  microsatellitestr
  Language:Python

• pseudogene / qdd-docker

  User-friendly computer program for microsatellite selection and primer design revisited - Now in a Docker

  dockerqddmicrosatellitebioinformatics
  Language:Dockerfile

• riosew / Mfind

  MFind Software

  bioinformaticsmicrosatellite
  Language:Java

• schellt / msat-loci-identification

  De novo microsatellite loci identification pipeline as used in Schröder et al. (2021)

  microsatelliteprimer-designmultiplexing
  Language:Perl

• sravel / MLG_assign

  Multi-Locus Genotypes (MLGs) are frequently used to carry out population genetics of clonal organisms. Tools to assign genotyped individuals to MLGs were integrated in some genetic software. However, these tools usually fail to appropriately deal with missing data.

  mlggeneticsmicrosatellite
  Language:Python

• zkamvar / repvar

  R package to find samples that represent all variables

  rgeneticsmicrosatellitealleles
  Language:R