kmer-composition

There are 0 repository under kmer-composition topic.

• anuradhawick / kmertools

  kmer based feature extraction tool for bioinformatics, metagenomics, AI/ML and more

  bioinformaticskmer-compositionkmer-countingkmer-frequency-countmetagenomics
  Language:Rust 29

• BioJulia / KmerAnalysis.jl

  K-mer counting algorithms and count-data utilities for the BioJulia framework

  biojuliakmerkmer-countingkmer-distributionkmer-frequency-countkmer-compositionkmerskmer-spectra
  Language:Julia 12

• navjindervirdee / Genome-Sequencing

  Assembled Phi-X174 genome using Overlap Graph, Kmer Composition and De-Bruijn Graph.

  javaoverlap-graphdebruijn-graphkmer-compositiongenome-assemblygenome-sequencingphi-x174eulerian-circuithamiltonian-cyclesdirected-graphgraphgraph-algorithmstip-removalbubble-detectionreadserror-correctingcycles
  Language:Java 10

• ArthurVM / TreeMer

  A simple tool to generate hierarchical clustering trees from nucleotide sequences. Supports a number of distance metrics and clustering algorithms. Includes a large testset of SARSCOV2 genomes.

  hierarchical-clustering-treesdistancesarscov2bioinfophylogenetic-treesgenome-analysiskmer-composition
  Language:Python 0

• alexpreynolds / kmer-boolean

  Test if a kmer is or is not in a set of sequences

  kmerkmer-compositioncpp14bioinformaticspython
  Language:C++

• codecreatede / kmer-count

  ruby iter for implementation of kmer count

  bioinformaticskmer-compositionkmer-countingkmer-frequency-countruby-devrubygemrubylanguagestring-manipulationstrings-manipulationkmer-genome
  Language:Ruby