glioma

There are 1 repository under glioma topic.

shalabh147 / Brain-Tumor-Segmentation-and-Survival-Prediction-using-Deep-Neural-Networks
Use of state of the art Convolutional neural network architectures including 3D UNet, 3D VNet and 2D UNets for Brain Tumor Segmentation and using segmented image features for Survival Prediction of patients through deep neural networks.
aiformedicine brain-tumor-segmentation brats-dataset cnn-segmentation deep-learning deep-neural-networks dice-coefficient dice-loss dice-scores glioma keras-tensorflow medical-imaging mri-segmentation segmentation survival-models survival-prediction unet-3d unet-architecture vnet3d
Language:Jupyter Notebook 163
BraTS-Toolkit
neuronflow / BraTS-Toolkit
Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.
glioblastoma glioma medical-imaging mri segmentation
Language:Python 71
MIC-DKFZ / image-time-series
Code for deep learning-based glioma/tumor growth models
attentive-neural-processes glioma neural-processes tumor-growth
Language:Python 21
edukait / glioma-classification
The purpose of this project is to be able to automatically and efficiently segment and classify high-grade and low-grade gliomas.
segmentation classification-task glioma brats2018 convolutional-neural-networks support-vector-machines random-forest-classifier machine-learning
Language:Jupyter Notebook 14
jSTABL
ReubenDo / jSTABL
Learning joint Segmentation of Tissues And Brain Lesions (jSTABL) from task-specific hetero-modal domain-shifted datasets
brain segmentation glioma pytorch missing-modalities domain-adaptation
Language:Python 13
pykao / BraTS2018-survival-prediction
We provide a method to extract the tractographic features from structural MR images for patients with brain tumor
survival-prediction brats2018 tractography fiber-tracts overall-survival-prediction tractographic-feature machine-learning glioma connectomics
Language:Python 10
JiajinChen / APOLLO
APOLLO is an Accurate and independently validated Prediction mOdel of Lower-grade gLiomas Overall survival
glioma online-tool prediction-model
Language:R 7
Computational-Imaging-LAB / IRIS-MRS-AI
IRIS-MRS-AI is a tool that classifies IDH and TERTp mutations in gliomas. Besides these capabilities, IRIS-MRS-AI is a tool that can create custom models using users' data.
machine-learning tool glioma mrshub mrs
Language:MATLAB 6
saizk / GlioScan
IDH Classification for Gliomas using CNN and Transformers.
classification deep-learning idh magnetic-resonance-imaging mri idh-classification idh-status captk neural-networks cnn cnn-classification transformers attention-classification glioma
Language:Jupyter Notebook 5
thesis
sakhadyaksa / thesis
An implementation of Mask R-CNN algorithm to perform automatic object detection, localization, classification and instance segmentation of immunoreactive tumor cells on Ki-67 stained glioma images.
maskrcnn glioma
Language:Jupyter Notebook 4
tomealbuquerque / multimodal-glioma-biomarkers-detection
Multimodal Context-Aware Detection of Glioma Biomarkers using MRI and WSI
biomarker-discovery deep-learning digital-pathology glioma mri-images multimodal-deep-learning
Language:Python 4
andreped / neukit
:hugs: neukit: web application for automatic brain extraction and preoperative tumor segmentation from MRI
deep-learning demo huggingface meningioma mri pretrained segmentation spaces t1 web-app brain brain-extraction glioma metastasis tumor high-grade low-grade raidionics
Language:Python 3
AiPBAND / gliobase
Glioblastoma multiforme (GBM) biomarker knowledge base
glioblastoma glioma knowledge-base biomarkers
Language:JavaScript 1
andreasstefani / autofocus-layer
NiftyNet-based implementation of the Autofocus Layer for semantic segmentation.
deep-learning machine-learning medical-imaging convolutional-neural-networks autofocus-layer brain-tumor-segmentation niftynet glioma
Language:Python 1
andreasstefani / autofocus-net
NiftyNet-based implementation of Autofocus Net and Autofocus Layer.
deep-learning machine-learning medical-imaging convolutional-neural-networks autofocus-layer brain-tumor-segmentation niftynet glioma
Language:Python 1
Computational-Imaging-LAB / T2-Hyp-Segmentor
This repo is for segmentation of T2 hyp regions in gliomas.
glioma tumor-segmentation unet unet-image-segmentation
Language:Python 1
hzluyali / AMF-Net-for-Automatic-brain-Tumor-Classification
TensorFlow Version of AMF-Net for glioma grading and the classification of meningiomas and gliomas
tensorflow amf-net glioma
Language:Python 1
leorrose / SLGC-tissue-similarity-and-grading
Nondestructive Spatial Lipidomics for Glioma Classification - Tissue Similarity and Grading
cancer-research deep-learning glioma machine-learning mass-spectrometry-imaging processing statistics visualization
Language:Python 1
madison-freeman / brain-tumor-classification-model
In this project, we created a convolutional neural network using the EfficientNetB1 model in Keras to perform Image Classification of MRI brain scans with reasonably high (97.4%) accuracy.
efficientnetb1 convolutional-neural-network classification-model mri brain tumor pituitary meningioma glioma
Language:Jupyter Notebook 1
tario-you / cismlg
CIS Research Program 2022; MIT Professor Manolis Kellis; Machine Learning and Deep Learing in Genomics and Health; U-Net CNN LGG Segmentation - concatenation hyperparameter tuning
concatenation deep-learning glioma image-segmentation u-net
Language:Python 1
zaritskylab / SLGC-tissue-similarity-and-grading
Nondestructive Spatial Lipidomics for Glioma Classification - Tissue Similarity and Grading
cancer-research deep-learning glioma machine-learning mass-spectrometry-imaging processing statistics visualization
Language:Python 1
Abir0606 / Brain-Tumor-Classification-using-CNN
Brain tumor classification using normal cnn . The code here is completely basic and shows how to get an accuracy also how to classify a certain data.
brain-tumor-classification cnn cnn-classification cnn-keras cnn-model glioma meningioma pituitary-tumor
Language:Jupyter Notebook 0
alelicciardi99 / glioblast
This repository contains Matlab codes developed for the thesis of the exam of Mathematical Models for Biomedicine, a.y. 2022-23, Master of Science in Mathematical Engineering at Politecnico di Torino, held by proff. Chiara Giverso, Luigi Preziosi, Luca Mesin. This work had been developed in cooperation with Lorenzo Vito Dal Zovo and Enrico Ortu.
glioblastoma glioma machine-learning mixture-density-network netlab politecnico-di-torino biomedical-machine-learning neural-parameter-estimation
Language:MATLAB 0
asai2019 / glioma-differentiation-sde
Exploring the Information Content of Glioma Differentiation using SDEs
stochastic-differential-equations glioma information-theory mutual-information channel-capacity k-nearest-neighbours principal-component-analysis matlab k-means-clustering
Language:MATLAB 0
nibr-lab / Fractal-Dimension-and-Lacunarity-in-Gliomas
Calculation of 2D Fractal Dimension and Lacunarity in MR Images of gliomas
fractal-dimension glioma jupyter lacunarity magnetic-resonance-imaging python
Language:Jupyter Notebook 0
raidionics / Raidionics-HF
🤗 HuggingFace space for Raidionics 🤗
glioma huggingface meningioma metastasis mri-segmentation raidionics
Language:Python 0
sraja2911 / pathomics_research
Pathomics Research Projects
pathomics digitalpathology glioma

glioma

shalabh147 / Brain-Tumor-Segmentation-and-Survival-Prediction-using-Deep-Neural-Networks

neuronflow / BraTS-Toolkit

MIC-DKFZ / image-time-series

edukait / glioma-classification

ReubenDo / jSTABL

pykao / BraTS2018-survival-prediction

JiajinChen / APOLLO

Computational-Imaging-LAB / IRIS-MRS-AI

saizk / GlioScan

sakhadyaksa / thesis

tomealbuquerque / multimodal-glioma-biomarkers-detection

andreped / neukit

AiPBAND / gliobase

andreasstefani / autofocus-layer

andreasstefani / autofocus-net

Computational-Imaging-LAB / T2-Hyp-Segmentor

hzluyali / AMF-Net-for-Automatic-brain-Tumor-Classification

leorrose / SLGC-tissue-similarity-and-grading

madison-freeman / brain-tumor-classification-model

tario-you / cismlg

zaritskylab / SLGC-tissue-similarity-and-grading

Abir0606 / Brain-Tumor-Classification-using-CNN

alelicciardi99 / glioblast

asai2019 / glioma-differentiation-sde

nibr-lab / Fractal-Dimension-and-Lacunarity-in-Gliomas

raidionics / Raidionics-HF

sraja2911 / pathomics_research