ReubenDo

U-HVED

Hetero-Modal Variational Encoder-Decoder for Joint Modality Completion and Segmentation

InExtremIS

Official PyTorch implementation of InExtremIS

MRIPreprocessor

jSTABL

Learning joint Segmentation of Tissues And Brain Lesions (jSTABL) from task-specific hetero-modal domain-shifted datasets

MHVAE

pydeface-niftyreg

defacing utility for MRI images

SlicerSkinExtractor

ReMIND2Reg

Official repository for the ReMIND2Reg Challenge

image-sorter2

Labeling interface for medical imaging

Medical-Cross-Modality-Domain-Adaptation-VS

[IJCAI'18] Unsupervised Cross-Modality Domain Adaptation of ConvNets for Biomedical Image Segmentations with Adversarial Loss (code&data)

MHVAE-Seg

ReMIND

Scripts used for the conversion of the NRRD data to DICOM data

biva-pytorch

Official PyTorch BIVA implementation (BIVA: A Very Deep Hierarchy of Latent Variables for Generative Modeling)

dijkstra3d

Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D (Volumetric) Image Volumes

HD-BET

MRI brain extraction tool

highresnet

PyTorch implementation of HighRes3DNet

LNQ2023-evaluation

MONAI

AI Toolkit for Healthcare Imaging

ProjectWeek

Website for NA-MIC Project Weeks

reubendo.github.io

Research website of Reuben Dorent

SkinSegmentator

Skin Segmentator

SlicerParcellation

3D Slicer modules for brain segmentation using deep learning.

SlicerSkinSegmentator

Slicer Module for Skin Segmentator

SlicerTumorSegmentator

TumorSegmentator

ummkd

[TMI'20] Unpaired Multi-modal Segmentation via Knowledge Distillation

XCLThesisTemplate

A thesis template compliant with King's College London and UCL rules