genetic-interactions

There are 0 repository under genetic-interactions topic.

• sellerslab / gemini

  GEMINI: A variational Bayesian approach to identify genetic interactions from combinatorial CRISPR screens

  computational-biologycrisprgenetic-interactions
  Language:R 15
• GRETTA

  ytakemon / GRETTA

  GRETTA (Genetic inteRaction and EssenTiality neTwork mApper): An R package for mapping genetic interaction and essentiality networks

  bioinformaticsgenetic-interactionsr
  Language:R 9

• asmagen / SPAGEfinder

  Computational approach to identify Survival associated Pairwise Gene Expression states.

  geneticinteractiongenetic-interactionstcga-datasurvival-analysis
  Language:R 8

• biolab / red

  Inference of Epistatic Gene Networks

  network-inferenceepistasisgenetic-interactionsmutant-data
  Language:Python 3

• dizak / prwlr

  Integrating genetic interactions networks and phylogenetic profiles.

  genetic-interactionsphylogenetic-profilespython
  Language:Python 2
• kras-allele-genetic-interactions

  Kevin-Haigis-Lab / kras-allele-genetic-interactions

  A genetic study of the allele- and tissue- specific interactions of the KRAS alleles.

  krascancercancer-geneticsgenetic-interactionskras-allelesactivating-mutations
  Language:HTML 1

• abearab / GISEA

  Genetic Interaction Networks and Pathway Modules

  crisprgenetic-interactions
  Language:Python

• boutroslab / Supp_Heigwer_2021

  The functional analysis of genes provides relevant information to understand cellular function. Further, the mapping of genetic interactions sheds light on how genes act in the emergence of cellular complexity. Here, we present the most extensive genetic interaction and morphological profiling screen in a metazoan cell to date. We profiled 680 000 pairwise RNAi perturbations in more than 38 billion cells and analyzed 73 morphological features by high-throughput imaging.

  genetic-interactionsmorphological-analysissingle-cell-analysisgene-functionsignaling-pathways
  Language:HTML

• MarraLab / KMT2D_genetic_network_study

  Supporting material for upcoming manuscript on KMT2D in silico genetic networks

  publicationsgenetic-interactions
  Language:R

• rraadd88 / sgatools

  For the analysis and visualization of array-based genetic interaction screens

  genetic-interactionsryeast
  Language:Jupyter Notebook