There are 2 repositories under fiji-macro-language topic.
#ZVQ - Zebrafish Vascular Quantification - https://doi.org/10.1242/dev.199720
#GliaMorph - Toolkit to Process and Analyse Müller Glia Morphology
Automatisiert Auswertung von Mikroskopbildern
FIJI/Image J macros created by NOBIC staff for microscopy facilities users
This is a full macro for images analysis, cell count and co-staining cell count. Different options are available to analyse your image. You can count co-staining cell in unlimited number of images. the counting is done by size. There is an option to batch image analysis to save some time. You can personnalize the code and the analysis to maximize time by avoiding unwanted options.