cis-regulatory-elements

There are 0 repository under cis-regulatory-elements topic.

NAMlab / DeepCRE
Deep learning the cis-regulatory code for gene expression in selected model plants
cis-regulatory-elements deep-learning genomics
Language:R 5
santiago1234 / MZT-rna-stability
Crosstalk between codon optimality and 3' UTR cis-elements dictates mRNA stability
genomics bioinformatics biological-data-analysis gene-regulation mrna-stability codon-optimality cis-regulatory-elements paper
Language:Jupyter Notebook 5
pughlab / BCa_ATACSEQ_Project
This repository contains custom code used for analysis in El Ghamrasni et al.,
atac-seq promoters cis-regulatory-elements cistrome non-coding-variants
Language:R 2
PelFritz / DeepCRE
This project contains code used in my work on predicting gene expression from cis-regulatory sequences
cis-regulatory-elements deep-learning genomics
Language:R 0
ytanaka-bio / cisMultiDeep
Workflow to identify functional cis-regulatory regions for each annotated cell type
cis-regulatory-elements cross-species deep-learning enhancers hi-c promoters shap single-cell-atac-seq single-cell-methylation single-cell-multiomics single-cell-rna-seq
Language:Python 0
jtwrt / VARIANT_VISUALIZER
bioinformatics cis-regulatory-elements genomic proteins transcripts visualization somatic-mutations
Language:Jupyter Notebook
TomKellyGenetics / UniverSCAFE
Docker container for combining UniverSC and SCAFE for 5' RNA-Seq data
single-cell scrna scrna-seq five-prime bioinformatics genomics cis-regulatory-elements
Language:Dockerfile