Tom Kelly's repositories
hicup-plus
Hi-C data processing pipeline (with Dragen and HiSAT2 aligners)
.github
Files for the @nf-core GitHub organisation
assessment-archives
An archive of all the versions of the Carpentries surveys
atac-seq-pipeline
ENCODE ATAC-seq pipeline
bioc-rnaseq
Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor
bioc-rnaseq-ja
repository created automatically based on translations. Please submit Issues and PRs to https://github.com/swcarpentry-ja/i18n
carpentries-coc
Community Documentation for the Carpentries
cellranger
10x Genomics Single Cell 3' Gene Expression and VDJ Assembly
cellranger_clean
10x Cell Ranger Docker Image
dropSeqPipe
A SingleCell RNASeq pre-processing snakemake workflow
Gviz
This is the Gviz development repository. Gviz plots data and annotation information along genomic coordinates.
hello-github
Evidence that GitHub contributions are a worthless measure of programming competency or work ethic
matrixcalc
source for CRAN package matrixcalc
MultilayerGraphs.jl
A Julia package for the creation, manipulation and analysis of the structure, dynamics and functions of multilayer graphs.
nf-core-modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
Rmpi
:exclamation: This is a read-only mirror of the CRAN R package repository. Rmpi — Interface (Wrapper) to MPI (Message-Passing Interface). Homepage: http://fisher.stats.uwo.ca/faculty/yu/Rmpi/
rockstar
The Rockstar programming language specification
rtracklayer
R interface to genome annotation files and the UCSC genome browser
scrnaseq
A single-cell RNAseq pipeline for 10X genomics data
snow
:exclamation: This is a read-only mirror of the CRAN R package repository. snow — Simple Network of Workstations