single-cell-methylation

There are 1 repository under single-cell-methylation topic.

LKremer / scbs
Python package with CLI for downstream analysis of single cell methylation data.
dna-methylation dna-methylation-data methylation single-cell single-cell-methylation single-cell-rna-seq
Language:Python 10
JxTang-bioinformatics / CaMelia
imputation in single-cell methylomes
single-cell-methylation imputation-model
Language:Python 7
chooliu / snm3Cseq_Pipeline
bioinformatics pipeline for single-nucleus methylation & chromatin conformation capture assay (sn-m3C-seq)
single-cell-hic single-cell-methylation single-cell-multiomics
Language:Jupyter Notebook 0
chooliu / snmCTseq_Pipeline
Luo Lab snmCT-seq bioinformatics pipeline for joint single-nucleus methylation & transcriptome profiles.
single-cell-methylation snmct-seq single-cell-rna-seq smartseq2 single-cell-multiomics
Language:Jupyter Notebook 0
ytanaka-bio / cisMultiDeep
Workflow to identify functional cis-regulatory regions for each annotated cell type
cis-regulatory-elements cross-species deep-learning enhancers hi-c promoters shap single-cell-atac-seq single-cell-methylation single-cell-multiomics single-cell-rna-seq
Language:Python 0
aryeelab / scmeth
methylation bioconductor-package single-cell-methylation
Language:R