k-mer-frequency

There are 1 repository under k-mer-frequency topic.

bcgsc / ntCard
Estimating k-mer coverage histogram of genomics data
cardinality-estimation k-mer-counting k-mer-frequency hyperloglog streaming-algorithms
Language:C++ 76
pnnl / mercat
MerCat: python code for versatile k-mer counting and diversity estimation for database independent property analysis for meta -ome data
metagenomic-analysis metatranscriptomic-analysis kmer-frequency-count plotly diversity divideandconquer python dask k-mer-counting k-mer-frequency protein nucleotides fastq diversity-estimation database-independent-analysis
Language:Python 18
MatthewRalston / kmerdb
Python bioinformatics CLI for k-mer counts and de Bruijn graphs
bioinformatics bgzf python-cli k-mer-counting k-mer-frequency k-mer-hashing k-mer
Language:Python 12
raw-lab / mercat2
MerCat2: python code for versatile k-mer counting and diversity estimation for database independent property analysis for metaome data
python diversity plotly multiomics multiomics-data protein dask fastq k-mer-counting k-mer-frequency divideandconquer metagenomic-analysis metatranscriptomic-analysis kmer-frequency-count nucleotides diversity-estimation database-independent-analysis
Language:HTML 11