alignment-free-algorithm

There are 0 repository under alignment-free-algorithm topic.

• adigenova / fast-sg

  Fast-SG: An alignment-free algorithm for ultrafast scaffolding graph construction from short or long reads.

  scaffoldinggenome-assemblyilluminananoporepacbiohybrid-genome-assemblyalignment-free-algorithm
  Language:C++ 22

• BioinformaticsToolsmith / MeShClust2

  MeShClust2: Application of alignment-free identity scores in clustering long DNA sequences

  sequence-clusteringalignment-freebioinformatics-toolbioinformaticsalignment-free-algorithm
  Language:C++ 11

• bioinfo-ut / AluMine

  Scripts for discovery and genotyping polymorphic Alu element insertions in human genomes

  genomicsalignment-free-algorithmk-mertransposable-elementalurepeatmasker
  Language:Perl 6

• akiomiyao / ped

  Polymorphic Edge Detection - An efficient polymorphism detector for NGS data

  polymorphisminversioninsertionngsdeletionsnpk-merngstoolsalignment-free-algorithmsomatic-mutationsgenotypesequence-alignmentsvariantcnvcopy-number-variationcrispr-cas9
  Language:Perl 4

• xp3i4 / linear

  Framework of alignment-free method for variants detection.

  bioinformaticsgenomicsframeworkalignment-free-algorithm
  Language:C++ 2

• andriusbern / afp

  Alignment-Free phylogenetic tree construction from .fasta sequence files

  alignment-free-algorithmfastakmers
  Language:C++ 0