sequence-clustering

There are 0 repository under sequence-clustering topic.

• MMseqs2

  soedinglab / MMseqs2

  MMseqs2: ultra fast and sensitive search and clustering suite

  bioinformaticssequence-clusteringprofile-searchsequence-searchlinclustmmseqsmetagenomicsalignmentblasttaxonomy
  Language:C 1275

• BioinformaticsToolsmith / MeShClust

  MeShClust: an intelligent tool for clustering DNA sequences

  bioinformaticsclusteringsequence-clustering
  Language:C++ 34

• millanp95 / DeLUCS

  This repository contains all the source files required to run DeLUCS, a deep learning clustering algorithm for DNA sequences.

  sequence-clusteringtaxonomic-classificationdeep-learning
  Language:Python 24

• soedinglab / MMseqs

  mmseqssequence-clusteringalignmentopensourcecpp
  Language:C++ 14

• bailey-lab / SeekDeep

  Bioinformatic Tools for analyzing targeted amplicon sequencing developed by Nicholas Hathaway of Bailey Lab

  c-plus-plusbioinformaticssequence-clustering
  Language:C++ 13

• BioinformaticsToolsmith / MeShClust2

  MeShClust2: Application of alignment-free identity scores in clustering long DNA sequences

  alignment-freealignment-free-algorithmbioinformaticsbioinformatics-toolsequence-clustering
  Language:C++ 11

• krejciadam / hammock

  Cluster up to millions of peptide sequences on shared sequence motifs.

  bioinformaticsjavaclusteringsequence-clusteringmultiple-sequence-alignmentphage-display
  Language:Java 11

• IBCNServices / MCAppAnalysis

  Code to reproduce the experiments and the proposed visualization from 'Data mining in the development of mHealth apps: assessing in-app navigation through Markov Chain analysis'

  markov-chainsequence-clusteringuser-research
  Language:Jupyter Notebook 6

• wajidarshad / CD-Hit-parse_cluster_file

  CD HIT cluster file parser

  cd-hitsequence-alignmentsequence-clustering
  Language:Python 3

• mooreryan / derep_seqs

  Dereplicate long sequences

  bioinformaticssubstring-searchsequence-clustering
  Language:C 2
• protein-clustering

  mrzResearchArena / protein-clustering

  Protein Clustering

  evolutionary-scale-modelingkmeans-clusteringlinclustmmseqs2protein-clusteringsequence-clusteringunsupervised-learning
  Language:Jupyter Notebook 0