trackmate

There are 0 repository under trackmate topic.

• mastodon

  mastodon-sc / mastodon

  Mastodon – a large-scale tracking and track-editing framework for large, multi-view images.

  bioimage-analysiscell-lineageimglib2interactive-analysisinteractive-visualizationsjavalarge-imagesmicroscopy-imagestracking-algorithmtrackmate
  Language:Java 65

• Kapoorlabs-CAPED / NapaTrackMater

  Napari Visualization tool for Trackmate > 6.0 and bTrackmate XML files for 2/3D + time tracks. Available via pip package napatrackmater.

  trackmatenaparinapari-visualizationxml-files
  Language:Python 16

• trackmate-sc / TrackMate-CSVImporter

  An importer for CSV files in TrackMate.

  trackmatecsvimportertracking
  Language:Java 2

• ai4life-opencalls / oc-1-project-11

  Open Call #1: Segmentation and Tracking of Epithelial Cells

  bioimage-analysiscellposeimagejsegmentationtrackingtrackmate
  Language:Jupyter Notebook 0

• ai4life-opencalls / oc-1-project-6

  Open Call #1: Murine Skeletal Muscle Analysis

  bioimage-analysiscellposeimagejsegmentationtrackmate
  0

• jrijn / FijiTools

  FijiTools2020 is a collection of tools designed for use in ImageJ/Fiji. The code was written for the analysis of microscopy images in the lab of Mikael Sellin, Uppsala University. Some of the scripts are meant to work in conjunction with a separately performed Trackmate analysis.

  imagejtrackmatefiji
  Language:Python 0

• jlifferth / HCC_analysis

  Research project to track movement of Hepatoceullar Carcinoma cells.

  cancercell-segmentationcell-trackingfijihepatocellular-carcinomaimage-processingimagejlap-trackertrackmateviterbi-algorithm
  Language:Jupyter Notebook