Mastodon Science

mastodon

Mastodon – a large-scale tracking and track-editing framework for large, multi-view images.

mastodon-deep-lineage

A collection of plugins to analyse lineages of tracked objects in Mastodon

mastodon-blender-view

Mastodon 3D View that uses Blender

mastodon-tracking

Basic tracking algorithms based on Mastodon data structures.

python-mastodon-importer

mastodon-collection

mastodon-graph

mastodon-ellipsoid-fitting

mastodon-pasteur

Mastodon plugins developed in the context of Pasteur users projects.

matlab-mastodon-importer

A MATLAB importer for Mastodon files.

mastodon-ctc

Mastodon plugins to import from and export to (not only) the CellTrackingChallenge format

mastodon-documentation

The documentation of the Mastodon bioimage analysis tool.

mastodon-example-data

mastodon-grapher-opengl

mastodon-manual

Source for the Mastodon manual.

mastodon-tomancak

mastodon-git

A plugin for Mastodon that allows to collaborate on a project via Git.

.github

Public organization profile for the Mastodon-SC organization.

leviathan

Toying with extending mastodon core for another application.

mastodon-app

mastodon-averoflab

mastodon-collaborative

Mastodon plugins to foster collaborative annotations

mastodon-deploy-scripts

Utility scripts to build, release and deploy Mastodon as an application.

mastodon-ext-viewers

Tracking data transfers from Mastodon to various viewers (e.g., sciview or Blender)

mastodon-plugin-example

Template / example to get you started writing your own Mastodon plugin or extension.

mastodon-sciview

A bridge between Mastodon and sciview

mastodon-selection-creator

A selection creator UI for Mastodon, as a Mastodon plugin.

pom-mastodon