Mastodon Science's repositories
mastodon-deep-lineage
A collection of plugins to analyse lineages of tracked objects in Mastodon
mastodon-tracking
Basic tracking algorithms based on Mastodon data structures.
mastodon-blender-view
Mastodon 3D View that uses Blender
mastodon-pasteur
Mastodon plugins developed in the context of Pasteur users projects.
matlab-mastodon-importer
A MATLAB importer for Mastodon files.
mastodon-ctc
Mastodon plugins to import from and export to (not only) the CellTrackingChallenge format
mastodon-documentation
The documentation of the Mastodon bioimage analysis tool.
mastodon-manual
Source for the Mastodon manual.
mastodon-git
A plugin for Mastodon that allows to collaborate on a project via Git.
mastodon-collaborative
Mastodon plugins to foster collaborative annotations
mastodon-deploy-scripts
Utility scripts to build, release and deploy Mastodon as an application.
mastodon-ext-viewers
Tracking data transfers from Mastodon to various viewers (e.g., sciview or Blender)
mastodon-plugin-example
Template / example to get you started writing your own Mastodon plugin or extension.
mastodon-sciview
A bridge between Mastodon and sciview
mastodon-selection-creator
A selection creator UI for Mastodon, as a Mastodon plugin.