tfbs-discovery

There are 0 repository under tfbs-discovery topic.

• Danko-Lab / rtfbs_db

  Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.

  transcription-factorstranscription-factor-bindingmotiftfbs-discoveryenrichment-analysiscis-bpr
  Language:R 22

• wassermanlab / JASPAR-UCSC-tracks

  Code and data used to create the JASPAR UCSC Genome Browser tracks data hub

  gene-regulationtfbs-discovery
  Language:Python 11

• fanglab / BEAST

  Bacterial Epigenomics Analysis SuiTe

  bacteriaepigeneticsmethylationrna-seqsmrttfbs-discoverydifferential-expressionunix-shellhgtrecombination
  Language:R 9

• MyersGroup / MotifFinder

  An R package for de novo discovery of enriched DNA motifs (e.g. TFBS)

  finding-enriched-motifsr-packagetfbstfbs-discoverymotif-discoverytranscription-factor-bindingchip-seq
  Language:R 6

• wassermanlab / JASPAR-inference-tool

  Code and data used by the JASPAR profile inference tool

  gene-regulationtfbs-discoverylogistic-regression
  Language:Python 6

• brlauuu / motevowrapper

  Simple Python parser for MotEvo.

  motevotfbs-discoverymotiftranscription-factor-binding
  Language:Python 1

• petrokvitka / TFBScan

  A tool to search for motifs within the whole genome or regions of interest

  motiftfbstfbs-discoverymotif-discovery
  Language:Python