taxonomic-analysis

There are 0 repository under taxonomic-analysis topic.

• HKU-BAL / MegaPath-Nano

  MegaPath-Nano: Accurate Compositional Analysis and Drug-level Antimicrobial Resistance Detection Software for Oxford Nanopore Long-read Metagenomics; MegaPath-Nano-Amplicon: filtering module for metagenomic amplicon data

  taxonomic-analysisontamr-detection
  Language:C 14

• danielapierro / blobtools_tutorial

  Create a blobplot of a holobiont assembly without a reference genome. Example code and data are provided.

  metagenome-assemblytaxonomic-analysisholobiontmetatranscriptome-assembly
  Language:Perl 2

• CALeDNA / Anacapa

  Written by Emily Curd (eecurd@g.ucla.edu), Jesse Gomer (jessegomer@gmail.com), Gaurav Kandlikar (gkandlikar@ucla.edu), Zack Gold (zjgold@ucla.edu), Max Ogden (max@maxogden.com), Lenore Pipes (lpipes@berkeley.edu)and Baochen Shi (biosbc@gmail.com). Assistance was provided by Rachel Meyer (rsmeyer@ucla.edu).

  ednametabarcodingbioinformaticstaxonomic-analysissequence-analysis
  Language:Python 1

• ImPaisley / TaxaAbundance_Test

  Outlines the process of testing for statistical differences in certain taxa by group utilizing the phyloseq, tidyverse, and various statistical packages within R.

  16smicrobiome-analysisrtaxonomic-analysis
  Language:R