smallrna-seq

There are 0 repository under smallrna-seq topic.

RNAlysis
GuyTeichman / RNAlysis
RNA sequencing analysis software
rna-seq rna-seq-analysis rna-seq-pipeline rnaseq bioinformatics bioinformatics-pipeline bioinformatics-tool bioinformatics-analysis transcriptomics smallrna smallrna-seq gui-application
Language:Python 121
miRTop / mirtop
command lines tool to annotate miRNAs with a standard mirna/isomir naming
mirna isomirs formatter gff smallrna-seq
Language:Python 18
HCGB-IGTP / XICRA
Small RNAseq pipeline for paired-end reads
pipeline mirna smallrna-seq python
Language:Python 7
lpantano / seqclusterViz
visualization of seqcluster output, try at:
smallrna-seq smallrna visualization mirna trna-derived-small-rna
Language:JavaScript 6
bixBeta / TReX
RNA-seq, smRNA-seq, scRNA-seq & ATAC-seq workflows for @Cornell-Trex
10xgenomics bash-script bash-scripting ggplot2 mirdeep2 multiqc rnaseq scrna seurat shiny shiny-apps singlecell smallrna smallrna-seq star
Language:Shell 4
joey0214 / adapter4srna
3'Adapter in small RNA sequencing
adapter adapter-trimming ngs smallrna smallrna-seq
4
leahkemp / smncrna_analysis_template
Small non-coding RNA analysis template for analysing Illumina small RNAseq data.
smallrna smallrna-seq smallrnas differential-expression interactive-visualizations rshiny rshinyapp srna-seq
Language:HTML 1
tjh48 / segmentSeq
This package creates segmentation of the genome into regions of biological significance from high-throughput sequencing data.
bioconductor-package smallrna-seq methylation high-throughput-sequencing locus-map
Language:R 1
Tuteja-Lab / mouse.trophoblast.smallRNAseq
Extracellular Vesicle Contents of Mouse Trophoblast Cells and Their Predicted Influence on Fetal Brain Development
neurotransmitters placenta placenta-brain-axis proteomics serotonin smallrna-seq
Language:HTML 1
aGalhoz / Multi-Omics-PD
Bioinformatic differential expression analyses pipeline to investigate biomarkers in Parkinson disease.
parkinson-disease differential-expression-analyses transcriptomics smallrna-seq deseq2-analysis r-software
Language:R 0
ConYel / Dissertation
The scripting part of my Dissertation with the data analysis of all the datasets I used
pirna smallrna-seq wind workflow dissertation
0
kuhnlab-bayreuth / piRNAnalyzer
Fully automated analysis pipeline for planarian piRNAs
pipeline pirna smallrna-seq
0