Lorena Pantano's repositories
seqcluster
small RNA analysis from NGS data
bcbioSmallRna
R package to analyze data after small RNAseq with bcbio
seqclusterViz
visualization of seqcluster output, try at:
bcbio-nextgen
Validated, scalable, community developed variant calling and RNA-seq analysis
dummychapter1
Example of package using inst files in the vignette
cambridge-bio-developer-ladies
material we talk in our meet-ups
bioprojectR
project template for rstudio compatible with my everyday bioinformatics work
datasciencecoursera
Repo for the data science certificate at coursera
datasharing
The Leek group guide to data sharing
lpantano.github.io
me lpantano.github.io
mirna-evolution-analysis
some basic script to make multi-alignment and parse the changes
modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
multi-package-containers
Testing building mulled containers for multi-requirement tools.
nfcore-website
Nextflow public web site
rshiny-mot
rshiny showing table with multi-omic tools
test-datasets
Test data to be used for automated testing with the nf-core pipelines
women-leaders-compbio
a list of companies in boston area to list all women leaders