protein-secondary-structure

There are 0 repository under protein-secondary-structure topic.

peace195 / multitask-learning-protein-prediction
Multitask learning: protein secondary structure prediction, b-values prediction and solvent-accessibility prediction
protein-secondary-structure protein-b-values protein-solvent-accessibility multitask-learning deep-learning tensorflow protein-deep-learning-algorithm lstm bidirectional-lstm protvec
Language:Python 24
thuxugang / opus_fold
OPUS-Fold: An Open-Source Protein Folding Framework Based on Torsion-Angle Sampling
opus-fold protein-contact-map protein-folding protein-potential-functions protein-scoring-functions protein-secondary-structure protein-side-chain-modeling protein-strucutre-prediction protein-torsion-angles
20
thuxugang / opus_tass
OPUS-TASS: A Protein Backbone Torsion Angles and Secondary Structure Predictor Based on Ensemble Neural Networks
opus-tass protein-secondary-structure protein-torsion-angles
Language:Python 11
gkoulouras / seq-sec-ratio
A console application for the estimation of the primary and secondary structure's elements. Input should be the FASTA-formatted "ss.txt" file generated by PDB database.
pdb pdb-files ss-txt amino-acids secondary-structure bioinformatics-data bioinformatics-scripts bioinformatics-databases vb-net protein-data-bank protein-sequences protein-secondary-structure bioinformatics
Language:Visual Basic 3
katarinaelez / protein-ss-pred
Protein secondary structure predictor
gor protein-secondary-structure secondary-structure-prediction svm
Language:Jupyter Notebook 3
nickcafferry / PSSpred
PSSpred (Protein Secondary Structure prediction) is a simple neural network training algorithm for accurate protein secondary structure prediction. It first collects multiple sequence alignments using PSI-BLAST. Amino-acid frequence and log-odds data with Henikoff weights are then used to train secondary structure, separately, based on the Rumelhart error backpropagation method. The final secondary structure prediction result is a combination of 7 neural network predictors from different profile data and parameters. The program is freely downloadable at the bottom of this page.
protein protein-secondary-structure prediction-algorithm nerual-network acid-frequence henikoff-weights psi-blast
Language:Perl 2
jtang10 / MUFold-ss-pytorch
MUFold-ss protein secondary structure prediction implementation in pytorch
cnn-model inception protein-secondary-structure pytorch
Language:Python 1
yasirbarlas / protein-secondary-structure-prediction
Protein Secondary Structure Prediction (PSSP) using machine learning algorithms.
protein-secondary-structure protein-secondary-structure-prediction pssp
Language:Jupyter Notebook 0

protein-secondary-structure

peace195 / multitask-learning-protein-prediction

thuxugang / opus_fold

thuxugang / opus_tass

gkoulouras / seq-sec-ratio

katarinaelez / protein-ss-pred

nickcafferry / PSSpred

jtang10 / MUFold-ss-pytorch

yasirbarlas / protein-secondary-structure-prediction