protein-identification

There are 3 repositories under protein-identification topic.

compomics / peptide-shaker
Interpretation of proteomics identification results
proteomics protein-identification bioinformatics java
Language:Java 47
compomics / searchgui
Highly adaptable common interface for proteomics search and de novo engines
proteomics protein-identification bioinformatics java
Language:Java 39
pwilmart / PAW_pipeline
A Comet-based, best practices proteomics pipeline.
protein-identification proteomics comet protein-inference tmt python3
Language:Python 34
compomics / meta-proteome-analyzer
MetaProteomeAnalyzer (MPA) software for analyzing and visualizing MS-based metaproteomics data.
bioinformatics-pipeline database-searchtool metaproteomics protein-identification proteomics software
Language:TSQL 27
goldman-gp-ebi / protein-identification-manuscript
hidden-markov-model hmm hmmer hmmer3 protein-identification nanopore-protein-sequencing protein-sequencing
Language:Jupyter Notebook 1
kristiyanto / P3
Portable Proteomics Pipeline
proteomics protein-identification mass-spectrometry docker bioconductor
Language:R 1
builab / DomainFit
A pipeline to detect domains in cryo-EM density map by parsing domains from AlphaFold databases and fitting into the map for the best hits.
cryo-em cryo-et domain-parsing modelling protein-identification
Language:Python
Jakob37 / ProteomicsSearchEngineRunner
Wrapping script automating execution of Proteomic search engines, such as MSFragger.
proteomics bioinformatics protein-identification
Language:Python