haplogroup

There are 0 repository under haplogroup topic.

• seppinho / haplogrep-cmd

  HaploGrep - mtDNA haplogroup classification. Supporting rCRS and RSRS.

  classificatonhaplogroupmtdnangsphylotreesnp-genotyping
  Language:Java 72

• genid / Yleaf

  Yleaf software for human Y-chromosomal haplogroup inference from next generation sequencing data

  y-chromosomehaplogroupprediction-algorithmnext-generation-sequencingpython
  Language:Python 22

• alinja / snipsa

  Tools for analyzing raw DNA test data files. Shows Y chromosome and mitochondrial mtDNA haplogroups. LGPLv3 - use freely but share improvements.

  haplogroupmtdnamtdna-haplotypessnp-genotypingsnp
  Language:Python 10

• tycheleturner / ElGenomaPequeno

  El genoma pequeño - analysis workflow for "the little genome"

  genomicsilluminamitochondriagenomeheteroplasmyhaplogroupvariantssequencingwgsmap
  Language:R 4

• aurora-mareviv / mthapower

  Sample size and power for association studies involving mitochondrial DNA haplogroups -

  mitochondrialgeneticsdnahaplogroupsample-size
  Language:R 3

• Serg-Norseman / GKGenetix

  Simple genetic data analysis for GEDKeeper

  23andmeancestrydnachromosomesdata-analysisdnahaplogroupdecodemesnpvcfgeneticsdna-sequences
  Language:C# 1

• aobermayer4 / CPTAC_LUAD_HaploAnalysis

  Methods overview with scripts looking at mtDNA and haplogroup association with CPTAC LUAD study.

  cptacluadredgerlimmaglimmadgehaplogroupnsclc
  Language:R 0

• roncuevas / Polymorphism

  Programa Delfin 2022

  haplogrouphaplotypepolymorphismmitomaster
  Language:Python 0

• dionzand / tree_convert

  Tree Convert helps you to compare ISOGG and YFull haplogroup resolutions

  haplogroupisoggnomenclatureresolutiontreeyfull
  Language:Python

• hernanmd / PhyloclassTalk

  Phylogeographic text-mining platform

  bioinformaticspharopharo-smalltalkbiosmalltalkphylogeographypopulation-geneticshaplogroup