gene-duplication

There are 1 repository under gene-duplication topic.

• davidemms / OrthoFinder

  Phylogenetic orthology inference for comparative genomics

  gene-duplicationgene-treesorthogrouporthologs
  Language:Python 664

• almeidasilvaf / doubletrouble

  An R package to identify and classify duplicated genes from whole-genome protein sequence data

  bioinformaticscomparative-genomicsgene-duplicationmolecular-evolutionrstatswhole-genome-duplication
  Language:R 11

• piyalkarum / rCNV

  An R package for detecting copy number variants from SNPs data

  cnv-analysisgeneticsgenomicslandscape-geneticssnpscopy-number-variationcrangene-duplicationr
  Language:R 5

• almeidasilvaf / doubletroubledb

  A dashboard to explore and download the duplicated gene repertoire in eukaryote species

  evolutionary-genomicsgene-duplicationgenome-duplicationpolyploidyquarto-dashboardrstats
  Language:R 4

• Lin-Yuying / GuppyGeneDuplication

  Scripts for Lin, Y., Darolti, I., Furman, B. L. F., Almeida, P., Sandkam, B. A., et al., Breden, F., Wright, A. E., Mank, J. E. (2022) Gene duplication to the Y chromosome in Trinidadian Guppies. Molecular Ecology. https://doi.org/10.1111/mec.16355

  gene-duplicationguppysexually-antagonistic-selection
  Language:Jupyter Notebook 2

• vatj / gpmap_integer_polyomino

  Code repository for the analysis of the Genotype-Phenotype Map Properties of the Integer Polyomino Model.

  gene-duplicationgenotype-phenotype-mapspolyomino
  Language:C++ 0