dge-analysis

There are 0 repository under dge-analysis topic.

• bixBeta / DESeq2-shiny

  A shiny application to perform differential gene expression analysis of count data using DESeq2. The app also allows unsupervised exploration of data using PCA and hierarchical clustering.

  deseq2dge-analysispcapca-analysisrr-shinyrna-seqshinyshinydashboardshinyjsunsupervised-learning
  Language:R 2

• Tenzin-Nyima-1 / RiMod-FTD

  Scripts for the complete analysis pipeline: 1) generation of the count table; 2) annotation of the count-table and differential gene expression analysis; 3) Weighted Gene Coexpression Network Analysis; and, 4) the functional annotation (hypergeometric test) of the hits.

  rimod-ftdcageseq-datacount-tablepipelineannotationdge-analysis
  Language:R 1

• Aliama-Bi / Differencial-Gene-Analysis

  This study aims to figure out what is highly differentially expressed genes between Banff acute T-cell mediated rejection (TCMR) and normal kidney allograft biopsy specimens.

  dge-analysismlrna-seq
  Language:HTML 0

• michalbukowski / rnaseq-pipeline-1

  Simple Snakemake RNA-Seq pipeline

  rna-seqrnaseq-analysisrnaseq-pipelinedgedge-analysispython3rsnakemakesnakemake-pipelinesnakemake-rna-seqsalmonsalmon-deseq2pandasbioconductorminicondapythonminiconda3
  Language:Python 0

• michalbukowski / rnaseq-pipeline-2

  Simple Nextflow RNA-Seq pipeline

  bioconductordeseq2nextflownextflow-pipelinerna-seqrna-seq-analysisrna-seq-pipelinesalmonsalmon-deseq2dge-analysisnextflow-rnaseqminicondaminiconda-environmentsminiconda3r
  Language:Nextflow 0

• Pg-Pi3Gey / ms-chikv-deg

  main Repository for my Master's Thesis work

  bioinformaticsbioinformatics-pipelinedge-analysisngs-analysisngs-pipeline
  Language:R 0

• noucel / RNAseq-DGE

  RNA-seq Differential Gene Expression (DGE) analysis comparing multiple dataset samples involves the comparison of gene expression levels across multiple samples with the possibliity to account for defined conditions, treatments, or groups.

  dge-analysisrnaseq
  Language:R