LTLA

umappp

UMAP C++ implementation

scRNAseq

Clone of the Bioconductor repository for the scRNAseq package.

batchelor

Clone of the Bioconductor repository for the batchelor package.

CppIrlba

A C++ port of the IRLBA algorithm, based on the C code in the R package.

scran.chan

A slimmed down version of scran, based on the C++ library of the same name.

scuttle

Clone of the Bioconductor repository for the scuttle package.

BiocSingular

Clone of the Bioconductor repository for the BiocSingular package.

CppWeightedLowess

A standalone C++ implementation of limma::weightedLowess.

BiocNeighbors

Clone of the Bioconductor repository for the BiocNeighbors package.

CppKmeans

C++ port of R's Hartigan-Wong implementation

ParquetDataFrame

Bioconductor-friendly bindings for Parquet files.

csaw

Clone of the Bioconductor repository for the csaw package.

gesel.js

Client-side gene set queries.

byteme

C++ utilities for simple buffered inputs.

metapod

Clone of the Bioconductor repository for the metapod package.

aarand

Aaron's random distributions for C++

aggregate-demonstrator

Demonstration of how to vendor aggregateAcrossCells

csawBook

The book of the package.

gesel-manuscript

Manuscript for the gesel NPM package.

PCAtools

PCAtools: everything Principal Components Analysis

basilisk-manuscript

Manuscript for the basilisk package

emcmake-docker

Docker image for Emscripten + Cmake

LTLA

mumosa

Clone of the Bioconductor repository for the mumosa package.

powerit

Lightweight C++ library for power iterations

Rcpp

Seamless R and C++ Integration

reticulate

R Interface to Python

ScaledMatrix

Clone of the Bioconductor repository for the ScaledMatrix package.

TrajectoryUtils

Clone of the Bioconductor repository for the TrajectoryUtils package.

TSCAN

Clone of the Bioconductor repository for the TSCAN package.