BiocPy

rds2py

Read RDS files, in Python

GenomicRanges

Container class to represent genomic locations and support genomic analysis

MultiAssayExperiment

Container class to represent and manage multi-omics genomic experiments

scranpy

Single-cell data analysis, from C++ to Python

BiocFrame

Bioconductor-like data frames

SingleCellExperiment

Container class for single-cell experiments

SummarizedExperiment

Container class for genomic experiments

singler

Python bindings to the SingleR algorithm

Biocborn

bioc objects + seaborn

IRanges

IRanges in Python

pyBiocFileCache

Python implementation of the BiocFileCache R package

tutorial

tutorial for all bioconductor representations in Python

.github

BiocPy

Interface to all BiocPy packages

HDF5Array

HDF5 File-backed arrays for Python

mopsy

Matrix operations

assorthead

Assorted C++ headers, vendored into a Python package.

BiocUtils

Miscellaneous utilities for BiocPy, mostly to mimic base functionality in R.

cpptypes

Automatically generate wrappers for ctypes with C++

DelayedArray

DelayedArrays, in Python

developer_guide

generics

BiocPy generics

mattress

Interface to tatami representations

mattress-broken

Interface to tatami representations

scRNAseq

TileDBArray

TileDB backed delayed arrays for Python