Aaron Lun's repositories
SingleCellThoughts
Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.
csawUsersGuide
Clone of the Bioconductor repository for the csawUsersGuide workflow.
DropletTestFiles
Clone of the Bioconductor repository for the DropletTestFiles package.
TrojanBookBuilder
Sneak books onto the Bioconductor build system with a trojan package.
actions-anime-gif-slackbot
Post anime GIFs to Slack as a GitHub Action. What better way to annoy your co-workers?
anime-slack-cronjob
Hosts GitHub Actions that posts anime GIFs to my various slack channels.
main2master
Convert your main branch back to its rightful name.
scDblFinder
A simple, efficient tool to detect doublet cells directly from scRNAseq count data
AUCell
AUCell: score single cells with gene regulatory networks
BiocSeed
Setting the seed in Bioconductor packages
BiocStickers
Stickers for some Bioconductor packages - feel free to contribute and/or modify.
BiocStyle
Issues and pull requests for BiocStyle should go here.
DelayedArray
A unified framework for working transparently with on-disk and in-memory array-like datasets
DelayedMatrixStats
A port of the matrixStats API to work with DelayedMatrix objects from the DelayedArray package
DualIndexedMatrix
A DelayedArray backend that supports fast simultaneous row and column access.
ExperimentHub
Client to access ExperimentHub resources
IRanges
Foundation of integer range manipulation in Bioconductor
knitr
A general-purpose tool for dynamic report generation in R
MultiAssayExperiment
Bioconductor package for management of multi-assay data
ontoProc
Ontology processing for Bioconductor
RainbowBiocSticker
A rainbow-ized Bioconductor sticker.
rcppannoy
Rcpp bindings for Annoy
TileDB-R
R interface to the TileDB storage manager
Win32MatrixTest
Tests Matrix::tcrossprod numerical precision on Windows 32-bit