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Aaron Lun (LTLA)

LTLA

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Company:@Genentech

Location:San Francisco

Twitter:@realAaronLun

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ArtifactDB
BiocPy
cambiotraining
CollaboratorDB
iSEE
knncolle
tatami-inc

Aaron Lun's repositories

TileDBArray

Clone of the Bioconductor repository for the TileDBArray package.

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SummarizedExperiments.jl

Julia implementation of Bioconductor's SummarizedExperiment class

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MultiAssayExperiments.jl

Julia implementation of Bioconductor's MultiAssayExperiment.

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scran-cli

A command line interface to scran

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BumpyMatrix

Clone of the Bioconductor repository for the BumpyMatrix package.

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crio

CellRanger input/output

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DebuggingSpectra

Various files for debugging the Spectra library.

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GenomicFeatureVectors.jl

Julia implementation of Bioconductor's GenomicRanges(List) infrastructure.

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HDF5Arrays.jl

Julia implementation of Bioconductor's HDF5Array class.

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tsvd

Truncated SVD algorithms in C++

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uwot

An R package implementing the UMAP dimensionality reduction method.

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acceptable-anime-gifs-validator

Validator for the acceptable anime GIF database

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annoy

Approximate Nearest Neighbors in C++/Python optimized for memory usage and loading/saving to disk

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bind-h5wasm-test

Testing linkage to h5wasm's libhdf5.

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BiocFileCache

Manage Files Across Sessions

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BiocParallel

Bioconductor facilities for parallel evaluation

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chipseqDBData

Clone of the Bioconductor repository for the chipseqDBData package, see https://bioconductor.org/packages/devel/data/experiment/html/chipseqDBData.html for the official development version.

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DelayedRandomArray

Clone of the Bioconductor repository for the DelayedRandomArray package.

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GenomicRanges

Representation and manipulation of genomic intervals

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h5wasm-cmake-demo

Demonstration of how to pull in h5wasm's static libraries via CMake

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h5wasm-pthreads-MRE

A minimum reproducible example of my problem.

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hnswlib

Header-only C++/python library for fast approximate nearest neighbors

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js.matrix

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KmeansReinitialization2021

Materials to convince myself that the reinitialization works properly.

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pcg-cpp

PCG — C++ Implementation

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spacker

Small positive integer packer

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spectra

A header-only C++ library for large scale eigenvalue problems

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SummarizedExperiment

SummarizedExperiment container

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umap-fun

Demonstration of browser-side compute until Jay gets off his damn ass and gets back to work.

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zellkonverter

Conversion between scRNA-seq objects

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