Will Townes's repositories
willtownes.github.io
personal website/blog for technical topics (non-technical blog is at willtownes.wordpress.com )
epidatr
[DRAFT] Delphi Epidata API R Client
spatial-factorization-py
Probabilistic factor models for spatially correlated data. Includes nonnegative and real-valued versions.
tensorflow
sandbox for practice with tensorflow models
optimization-practice
sandbox for practice implementing optimization algorithms
longevity-paper
Supporting code for the paper "Identifying Longevity Associated Genes by Integrating Gene Expression and Curated Annotations"
quminorm-paper
supporting code for the quasi-UMIs single-cell RNA-seq paper
naivebayes
High performance implementation of the Naive Bayes algorithm in R
marsh
salamander ecology
vamf-paper
supporting code for the Varying-Censoring Aware Matrix Factorization paper
gp
Gaussian Processes and Bayesian Optimization
patel2014gliohuman
A Bioconductor "Summarized Experiment" from the Patel et al. (2014) paper that performed single cell RNA-Seq analysis on human glioblastoma tissue.
cthw
Learning C "the hard way" http://c.learncodethehardway.org/book/
haskell
sandbox for learning Haskell
ZIFA
Zero-inflated dimensionality reduction algorithm for single-cell data
scLVM
scLVM is a modelling framework for single-cell RNA-seq data that can be used to dissect the observed heterogeneity into different sources, thereby allowing for the correction of confounding sources of variation.
ped_parser
A python tool for parsing pedigree files
Web
Learning how to do web stuff like javascript
ebola-hackathon-2014
http://hackebolawithdata.challengepost.com/