willtownes

GPU-Puzzles

Solve puzzles. Learn CUDA.

chronos-forecasting

Chronos: Pretrained (Language) Models for Probabilistic Time Series Forecasting

gget

🧬 gget enables efficient querying of genomic reference databases

geospatial-data-catalogs

A list of open geospatial datasets available on AWS, Earth Engine, Planetary Computer, NASA CMR, and STAC Index

sky-follower-bridge

Instantly find and follow the same users from your X(Twitter) follower on Bluesky.

zotero-reading-list

Keep track of whether you've read items in Zotero

stan-statespace

Stan models for state space time series

pod5-file-format

Pod5: a high performance file format for nanopore reads.

delphi-epidata

An open API for epidemiological data.

conformal-time-series

Conformal prediction for time-series applications.

PHES-ODM

The Public Health Environmental Surveillance Open Data Model (PHES-ODM, or ODM). A data model, dictionary and support tools for environmental surveillance.

wastewater-informed-covid-forecasting

Wastewater-informed COVID-19 forecasting models submitted to the COVID-19 Forecast Hub

spatial-alignment

Alignment of spatial genomics data using deep Gaussian processes

nsf-coa

Generate NSF Collaborators and Other Affiliations Information from your publications

peakRAM

[EXPERIMENTAL] An R package to monitor the peak RAM used by R expressions and functions

STimage-1K4M

aquascope

BCCovidSnippets

Scripts and markdown pages for BC/Canada related COIVD graphs.

epiprocess

Tools for basic signal processing in epidemiology

gptools

Gaussian processes on graphs and lattices in Stan and pytorch.

FastRNA

FastRNA: Single-cell analysis of atlas-scale data on a laptop

scVAEIT

Variational autoencoder for single-cell integration and transfer learning.

covidcast-modeling

Data analyses surrounding Delphi's COVIDcast effort.

neural_likelihood_interactive_app

This is an interactive app (run on local computer) to visualize neural likelihood surfaces from the paper "Neural Likelihood Surfaces for Spatial Processes with Computationally Intensive or Intractable Likelihoods"

h5n1

State_FluSight_Forecasts

State FluSight Forecasts Submissions

epidatr

Delphi Epidata API R Client

metamoRph

us-treasury-rates

Covid_Prevalance

Converting existing Matlab repo to Python