viromics

There are 0 repository under viromics topic.

DennisSchmitz / Jovian_archive
Metagenomics/viromics pipeline that focuses on automation, user-friendliness and a clear audit trail. Jovian aims to empower classical biologists and wet-lab personnel to do metagenomics/viromics analyses themselves, without bioinformatics expertise.
viromics metagenomics ngs viruses virology public-health virus-typing clinical rivm erasmus diagnostics surveillance
Language:Python 18
poursalavati / SOVAP
The Soil Virome Analysis Pipeline (SOVAP) is designed to process, analyze, and annotate viromics and metagenomics data using cutting-edge tools, providing valuable insights into the virome and microbial communities found in complex environments, such as soil ecosystems.
metagenomics metatranscriptomics virome viromics bioinformatics
Language:Python 6
AstraBert / VirBiCla
A novel ML-based binary classifier to tell viral and non-viral long reads apart in metagenomic samples.
biodiversity dna genomics healthcare machine-learning microbiology viromics virus voting-classifier binary-classifier long-read-sequencing metagenomics oxford-nanopore virome
Language:Python 1
jonas-fuchs / ViralPrimerSchemes
Repository for pan-spefic primers designed for tiled full genome sequencing or qPCR of viral pathogens. Pathogens include amongst others Hepatitis E virus, Hepatitis A virus, Poliovirus and SARS-COV-2. Primers were designed with varVAMP.
ngs primers qpcr viromics tiled-sequencing hepatitis poliovirus sars-cov-2 bornavirus
1

DennisSchmitz / Jovian_archive