umls-metathesaurus

There are 3 repositories under umls-metathesaurus topic.

• som-shahlab / trove

  Weakly supervised medical named entity classification

  weak-supervisionweakly-supervised-learningpseudo-labelingbertlearning-with-noisy-labelsnertext-classificationbiomedicalumlsumls-metathesaurusontology
  Language:Python 68

• suamin / MIL-RBERT

  MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)

  bertbiobertumls-metathesaurusmedlinemultiple-instance-learningdistant-supervisionnoisy-datarelation-extractionbionlp
  Language:Python 19

• dhchenx / umls-similarity

  Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)

  unified-medical-language-systemumlsmedical-terminologymedical-conceptsemantic-similarityumls-similarityumls-metathesaurus
  Language:Perl 14

• odwyersoftware / umls-api

  Python client for the UMLS REST API https://documentation.uts.nlm.nih.gov/rest/home.html

  python-libraryumlsumls-databasesumls-metathesaurus
  Language:Python 6

• kevon217 / data-dictionary-cui-mapping

  This repository aims to speed up the process of querying and assigning relevant UMLS CUIs to fields in your data dictionary. Currently, you can customize batch query scripts that utilize the UMLS api, MetaMap api, and/or an experimental semantic search approach with vector embeddings. Further development in progress.

  bricsumls-cuiumls-metathesaurus
  Language:Python 5

• CBIIT / UMLS-MetaMap-API-Scripts

  This repository is dedicated to development of Python scripts which use API to UMLS MetaMap to map semantics of common data elemnts to UMLS and NCI concepts

  covid-19metamap-apincincitpythonumlsumls-cuiumls-metathesaurus
  Language:Python 3

• MUSC-TBIC / lexicon-tools

  umls-enginesumls-metathesaurusbiomedical-informaticsnlp-resourcesnatural-language-processing
  Language:Python 3

• yvoawk / getUMLS

  Rpackage to query the UMLS metathesaurus

  api-restrumls-metathesaurus
  Language:R 3

• anjani-dhrangadhariya / distant-PICO

  clinical-dataclinicaltrialsheorlabellingmeshmetamapmethodncbo-bioportalnlpontologiespicosnorkelsystematic-reviewsterminologyumlsumls-metathesaurusweak-supervisionweakly-supervised-learning
  Language:Jupyter Notebook 2

• karthik-d / ImageCLEFmedical-captioning-2023

  Scripts, figures, and working notes for the participation in ImageCLEFmedical, part of the 14th CLEF Conference, 2023.

  caption-generationclefconcept-detectiondeep-learningimage-captioningimageclefkeras-tensorflowscene-understandingumls-metathesaurus
  Language:Jupyter Notebook 2

• Catnary / py_search_umls

  pythonumls-metathesaurusumlshealthcaremedicinerest-api
  Language:Python 1

• DylanMontoya / ETL-UMLS

  Extract Transform and Load data using UMLS

  etlpythonumls-databasesumls-metathesaurusmysql-databasesnomed
  Language:Python 1

• meerapatelmd / metaorite

  R Package for utilizing the UMLS Metathesaurus loaded into a Postgres Database

  umls-metathesaurus
  Language:R 1

• Alvaro8gb / UMLS-Streamlit

  App that implements st.experimental_connection with UMLS API

  streamlitstreamlit-hackathonumls-metathesaurus
  Language:Python

• dimfeld / umls-rs

  A library and command-line utility for working with the UMLS Metathesaurus

  umlsumls-metathesaurus
  Language:Rust

• meerapatelmd / CallMeMaybe

  R Package that calls the UMLS Rest API

  umls-metathesaurusumlsapi
  Language:R